DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and Zbtb17

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001365755.1 Gene:Zbtb17 / 22642 MGIID:107410 Length:819 Species:Mus musculus


Alignment Length:348 Identity:91/348 - (26%)
Similarity:128/348 - (36%) Gaps:93/348 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 QRQIADALLGCRQVEGKAE-TKQQAAKRARVQVPAFKIVQATALKEPERQP---GEEDECEEFMK 140
            |.:.|||......||.|.: |...||..|       :.:..::.:|.|.:|   ||:.:.||...
Mouse   207 QTEKADAPREPPPVELKPDPTSSMAAAEA-------EALSESSEQEMEVEPASKGEDGQEEEGAG 264

  Fly   141 EEMLDEEFQFSEPDDSMPSSEEEFFTET-------------------TEI--------PCHICGE 178
            ...:.||....:..:....:||...|::                   ||.        .|..||:
Mouse   265 PATVKEEGMHLDNGEPPEENEESAGTDSGQELGMEGQNLRSGTYGDRTESKAYGSIIHKCEDCGK 329

  Fly   179 MFSSQEVLERHIKADT---------CQK--SEQATCNV---------------CGLKVKDDEVLD 217
            .|:.....:|||:..|         |.|  |:.|.|..               ||...:...:|:
Mouse   330 EFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLN 394

  Fly   218 LHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAE 282
            ||...|.|:....|..|.|.|:...|:.||..||..:|.||||.||..||.......||..||.:
Mouse   395 LHKKRHSGEARYRCGDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHDTD 459

  Fly   283 ---------------------------ENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDC 320
                                       :..|.|..|.:||.|....|.|||.|..::| |.|..|
Mouse   460 KEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKP-YVCTHC 523

  Fly   321 EKSFVDKYTLKVHKRVHQPVEKP 343
            ::.|.|...|:.|.|:|.. |||
Mouse   524 QRQFADPGALQRHVRIHTG-EKP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 6/34 (18%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..308 CDD:275368 20/75 (27%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
Zbtb17NP_001365755.1 BTB_POZ_ZBTB17_MIZ1 2..113 CDD:349515
PRK07003 <115..>266 CDD:235906 18/65 (28%)
COG5048 322..653 CDD:227381 66/226 (29%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 5/19 (26%)
C2H2 Zn finger 380..400 CDD:275368 5/19 (26%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
C2H2 Zn finger 464..484 CDD:275368 0/19 (0%)
C2H2 Zn finger 492..512 CDD:275368 9/19 (47%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 548..568 CDD:275368
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..651 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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