DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and ZNF268

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001159353.1 Gene:ZNF268 / 10795 HGNCID:13061 Length:947 Species:Homo sapiens


Alignment Length:389 Identity:96/389 - (24%)
Similarity:146/389 - (37%) Gaps:73/389 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RPF-CFVCGKEKSVGVFQLIEGCIVPG-TFKPIKDILKYF----EKIINQRLELLPNSAACRDCL 63
            :|: |..|||:.|...:.::...|..| ......:..|.|    :.:|:||:....|...|.:|.
Human   302 KPYGCNECGKDFSSKSYLIVHQRIHTGEKLHECSECRKTFSFHSQLVIHQRIHTGENPYECCECG 366

  Fly    64 EYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKA-ETKQQAAKRARVQVPAFKIVQATALKEPER 127
            :.....|:||.:......|.......|    ||| ..|.|.....|:..              ..
Human   367 KVFSRKDQLVSHQKTHSGQKPYVCNEC----GKAFGLKSQLIIHERIHT--------------GE 413

  Fly   128 QPGEEDECEEFM--KEEMLDEEFQFSEPDDSMPSSEEEFFTETTEI------------------- 171
            :|.|.:||::..  |..::..:...:.....:.|...:.||..:::                   
Human   414 KPYECNECQKAFNTKSNLMVHQRTHTGEKPYVCSDCGKAFTFKSQLIVHQGIHTGVKPYGCIQCG 478

  Fly   172 ----------------------PCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDE 214
                                  .|:.||:.|.|:..|..|.:..|.:|..:  ||.||.......
Human   479 KGFSLKSQLIVHQRSHTGMKPYVCNECGKAFRSKSYLIIHTRTHTGEKLHE--CNNCGKAFSFKS 541

  Fly   215 VLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRH 279
            .|.:|..:|.|:...||..|.|.||.|..::.|...|..:|.|:|..||:.|.|...:..|...|
Human   542 QLIIHQRIHTGENPYECHECGKAFSRKYQLISHQRTHAGEKPYECTDCGKAFGLKSQLIIHQRTH 606

  Fly   280 DAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKP 343
            ..|: ...|..|.:.|.||.....|.|||..::| |.|.:|.|:|..|..|.|||.||..| ||
Human   607 TGEK-PFECSECQKAFNTKSNLIVHQRTHTGEKP-YSCNECGKAFTFKSQLIVHKGVHTGV-KP 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..308 CDD:275368 15/48 (31%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 10/21 (48%)
C2H2 Zn finger 317..337 CDD:275368 9/19 (47%)
ZNF268NP_001159353.1 KRAB 81..141 CDD:214630
KRAB 81..120 CDD:279668
C2H2 Zn finger 278..298 CDD:275368
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 5/19 (26%)
zf-H2C2_2 347..371 CDD:290200 6/23 (26%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
zf-H2C2_2 375..397 CDD:290200 6/25 (24%)
C2H2 Zn finger 390..410 CDD:275368 7/23 (30%)
zf-H2C2_2 403..427 CDD:290200 5/37 (14%)
C2H2 Zn finger 418..438 CDD:275368 3/19 (16%)
zf-H2C2_2 430..454 CDD:290200 1/23 (4%)
C2H2 Zn finger 446..466 CDD:275368 3/19 (16%)
C2H2 Zn finger 474..494 CDD:275368 0/19 (0%)
COG5048 497..910 CDD:227381 61/176 (35%)
C2H2 Zn finger 502..522 CDD:275368 7/19 (37%)
C2H2 Zn finger 530..550 CDD:275368 6/19 (32%)
zf-H2C2_2 543..567 CDD:290200 9/23 (39%)
zf-C2H2 556..578 CDD:278523 8/21 (38%)
C2H2 Zn finger 558..578 CDD:275368 7/19 (37%)
C2H2 Zn finger 586..606 CDD:275368 6/19 (32%)
zf-H2C2_2 599..623 CDD:290200 6/24 (25%)
C2H2 Zn finger 614..634 CDD:275368 7/19 (37%)
zf-H2C2_2 626..650 CDD:290200 9/24 (38%)
C2H2 Zn finger 642..662 CDD:275368 9/19 (47%)
C2H2 Zn finger 670..690 CDD:275368
C2H2 Zn finger 698..718 CDD:275368
zf-H2C2_2 710..734 CDD:290200
C2H2 Zn finger 726..746 CDD:275368
zf-H2C2_2 739..763 CDD:290200
C2H2 Zn finger 754..774 CDD:275368
C2H2 Zn finger 782..802 CDD:275368
zf-H2C2_2 794..817 CDD:290200
C2H2 Zn finger 810..830 CDD:275368
C2H2 Zn finger 838..858 CDD:275368
zf-H2C2_2 851..875 CDD:290200
C2H2 Zn finger 866..886 CDD:275368
C2H2 Zn finger 894..914 CDD:275368
zf-H2C2_2 907..929 CDD:290200
C2H2 Zn finger 922..942 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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