DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and si:dkey-262g12.3

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_009299305.1 Gene:si:dkey-262g12.3 / 100534843 ZFINID:ZDB-GENE-060503-255 Length:389 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 259..308 CDD:275368
C2H2 Zn finger 288..303 CDD:275370
zf-C2H2 315..337 CDD:278523
C2H2 Zn finger 317..337 CDD:275368
si:dkey-262g12.3XP_009299305.1 COG5048 <54..225 CDD:227381
C2H2 Zn finger 78..98 CDD:275368
C2H2 Zn finger 106..126 CDD:275368
C2H2 Zn finger 134..154 CDD:275368
C2H2 Zn finger 162..182 CDD:275368
C2H2 Zn finger 190..210 CDD:275368
C2H2 Zn finger 218..238 CDD:275368
SFP1 <235..323 CDD:227516
C2H2 Zn finger 246..266 CDD:275368
C2H2 Zn finger 274..294 CDD:275368
C2H2 Zn finger 302..322 CDD:275368
C2H2 Zn finger 330..350 CDD:275368
zf-H2C2_2 342..367 CDD:316026
C2H2 Zn finger 358..378 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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