DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and znf1147

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001108581.1 Gene:znf1147 / 100141494 ZFINID:ZDB-GENE-080218-13 Length:260 Species:Danio rerio


Alignment Length:251 Identity:76/251 - (30%)
Similarity:118/251 - (47%) Gaps:27/251 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KIVQATALKEPERQPGEEDECEEFMKEEM-----LDEEFQFSEPDDSMPSSEEEFFTETT----- 169
            ||.:...:|:.:.|   |......:|||.     :||::||.:|.: :.:.|:...|:.|     
Zfish    12 KIEETFTVKQEDLQ---EQSDRMVLKEETHGQNEIDEKWQFEKPQE-ITTDEKPTLTKKTLSHGR 72

  Fly   170 --------EIPCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGK 226
                    ...|.:|.:.||.:..|:.|::..|.:|  ..||..||......:.|..||.:|.|:
Zfish    73 PRKSKSGCNFSCKLCSKSFSQKSNLDVHMRVHTGEK--PYTCEQCGQSFSQKQCLKTHMRIHTGE 135

  Fly   227 TELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVC 291
            ....|:.|.|.||.|.|:..||.||..:|.|.|::||:.||......:|:..|.. |....|:.|
Zfish   136 KPFSCKQCGKSFSQKPNLDIHMRVHTGEKPYTCEQCGKSFSQKQSFKSHMRIHTG-ERPYTCQQC 199

  Fly   292 HQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPESAE 347
            .:.|:..|..:.|:|.|..::| :.|..|.||...|..|..|.||| .:|||.:.|
Zfish   200 GKSFRHARNLEVHMRIHTGEKP-FSCKQCRKSLSKKLNLIAHMRVH-TMEKPYTCE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..251 CDD:275368 9/19 (47%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
znf1147NP_001108581.1 zf-C2H2 82..104 CDD:278523 6/21 (29%)
C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
COG5048 <86..257 CDD:227381 59/173 (34%)
zf-H2C2_2 96..121 CDD:290200 8/26 (31%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
zf-H2C2_2 125..149 CDD:290200 9/23 (39%)
C2H2 Zn finger 140..160 CDD:275368 9/19 (47%)
zf-H2C2_2 152..177 CDD:290200 11/24 (46%)
C2H2 Zn finger 168..188 CDD:275368 6/19 (32%)
zf-H2C2_2 180..205 CDD:290200 6/25 (24%)
C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
zf-H2C2_2 208..230 CDD:290200 6/22 (27%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
zf-H2C2_2 236..259 CDD:290200 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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