DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and znf1147

DIOPT Version :10

Sequence 1:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001108581.1 Gene:znf1147 / 100141494 ZFINID:ZDB-GENE-080218-13 Length:260 Species:Danio rerio


Alignment Length:251 Identity:76/251 - (30%)
Similarity:118/251 - (47%) Gaps:27/251 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KIVQATALKEPERQPGEEDECEEFMKEEM-----LDEEFQFSEPDDSMPSSEEEFFTETT----- 169
            ||.:...:|:.:.|   |......:|||.     :||::||.:|.: :.:.|:...|:.|     
Zfish    12 KIEETFTVKQEDLQ---EQSDRMVLKEETHGQNEIDEKWQFEKPQE-ITTDEKPTLTKKTLSHGR 72

  Fly   170 --------EIPCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGK 226
                    ...|.:|.:.||.:..|:.|::..|.:|  ..||..||......:.|..||.:|.|:
Zfish    73 PRKSKSGCNFSCKLCSKSFSQKSNLDVHMRVHTGEK--PYTCEQCGQSFSQKQCLKTHMRIHTGE 135

  Fly   227 TELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVC 291
            ....|:.|.|.||.|.|:..||.||..:|.|.|::||:.||......:|:..|.. |....|:.|
Zfish   136 KPFSCKQCGKSFSQKPNLDIHMRVHTGEKPYTCEQCGKSFSQKQSFKSHMRIHTG-ERPYTCQQC 199

  Fly   292 HQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPESAE 347
            .:.|:..|..:.|:|.|..::| :.|..|.||...|..|..|.||| .:|||.:.|
Zfish   200 GKSFRHARNLEVHMRIHTGEKP-FSCKQCRKSLSKKLNLIAHMRVH-TMEKPYTCE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..251 CDD:275368 9/19 (47%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:395048 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
znf1147NP_001108581.1 C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
COG5048 <86..257 CDD:227381 59/173 (34%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
C2H2 Zn finger 140..160 CDD:275368 9/19 (47%)
C2H2 Zn finger 168..188 CDD:275368 6/19 (32%)
C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)

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