DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and zgc:174653

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001108366.1 Gene:zgc:174653 / 100141328 ZFINID:ZDB-GENE-080218-2 Length:392 Species:Danio rerio


Alignment Length:218 Identity:64/218 - (29%)
Similarity:99/218 - (45%) Gaps:18/218 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 MKEEMLDEEFQFSEPDDSMPSSEEEFFTETT-------------EIPCHICGEMFSSQEVLERHI 190
            |.:|...::.:..|....:|:.|:...|:.|             ...|....:.||.:..|..|:
Zfish     9 MLKEETHQQNEVEEKHQDIPTDEKPTLTKKTSSHRRHLNYKSECNFSCKQSRKSFSQKPNLGVHM 73

  Fly   191 KADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKK 255
            :....:|  ..||..||........|..||.:|.|:....|:.|.|.|.:.||:..||.:|..:|
Zfish    74 RVHNREK--HYTCKQCGKSFPKIHFLKAHMRIHIGERSYTCQQCGKIFHYARNLAVHMRIHTGEK 136

  Fly   256 KYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDC 320
            .|.|.:||:.|..:..:..|:..|.. |.:..|..|.:.|..|:..|.|:|.|..::| :.|.:|
Zfish   137 PYSCPQCGKSFKQNNNLEVHMRTHTG-ERSFTCTQCGKSFAKKQNLKIHMRIHTGEKP-FTCTEC 199

  Fly   321 EKSFVDKYTLKVHKRVHQPVEKP 343
            .|||.:|.||.:|||.|.. |||
Zfish   200 GKSFRNKSTLNIHKRTHTG-EKP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..251 CDD:275368 8/19 (42%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 11/19 (58%)
zgc:174653NP_001108366.1 C2H2 Zn finger 56..76 CDD:275368 5/19 (26%)
C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
COG5048 <117..363 CDD:227381 40/108 (37%)
zf-H2C2_2 124..149 CDD:290200 10/24 (42%)
C2H2 Zn finger 140..160 CDD:275368 5/19 (26%)
zf-H2C2_2 152..176 CDD:290200 5/24 (21%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
zf-H2C2_2 180..205 CDD:290200 10/25 (40%)
C2H2 Zn finger 196..216 CDD:275368 11/19 (58%)
zf-H2C2_2 209..231 CDD:290200 8/14 (57%)
C2H2 Zn finger 224..244 CDD:275368
zf-H2C2_2 237..261 CDD:290200
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 280..300 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 335..355 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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