DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and AT1G02030

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_171705.1 Gene:AT1G02030 / 839285 AraportID:AT1G02030 Length:267 Species:Arabidopsis thaliana


Alignment Length:325 Identity:64/325 - (19%)
Similarity:100/325 - (30%) Gaps:109/325 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 CKKCCEKLARYHKSIQIARKLRGEILE--LIHSPYMSKDHKQTSYKEDDLDRETTISKFDGNIEE 113
            ||.|       .||....|.|.|.:..  ||| |..|:..   ||.....|....:...:...|.
plant     7 CKLC-------WKSFANGRALGGHMRSHMLIH-PLPSQPE---SYSSSMADPGFVLQDRESETES 60

  Fly   114 AQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTFIIKQSEEE---DEFHSVDLELDID--NE 173
            :::...:...|..              ..::...|    :||.||   :...:.|:::.:.  :|
plant    61 SKKPSRKRSRLNR--------------RSISSLRH----QQSNEEGKSETARAADIKIGVQELSE 107

  Fly   174 IIINEEEAHEVEEVAHEIEEVAHEIEEEDLLPHDKQEAQEEDFFKEDTMSDFDEHLDGAIEYIIS 238
            ....:|....|.:.|...|:||..:.   ||..||.|.:||                        
plant   108 SCTEQEPMSSVSDAATTEEDVALSLM---LLSRDKWEKEEE------------------------ 145

  Fly   239 DGEDQEQDNESSGEYTVNIQCPSCPEKFSSRRAYNVHTKREHFPGYVCDQCGKTLQSYSGFIGHL 303
                 |.|.|                          ..|::....:.|:.|.|..:||....||.
plant   146 -----ESDEE--------------------------RWKKKRNKWFECETCEKVFKSYQALGGHR 179

  Fly   304 QNHE----PVKQFACPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDS 364
            .:|:    ...|.......:: .:|....||          :|.:|:|.|....||..||..|.|
plant   180 ASHKKKIAETDQLGSDELKKK-KKKSTSSHH----------ECPICAKVFTSGQALGGHKRSHAS 233

  Fly   365  364
            plant   234  233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 3/19 (16%)
zf-H2C2_2 327..351 CDD:290200 6/23 (26%)
C2H2 Zn finger 342..391 CDD:275368 10/23 (43%)
zf-H2C2_2 383..408 CDD:290200
C2H2 Zn finger 399..419 CDD:275368
C2H2 Zn finger 432..449 CDD:275368
AT1G02030NP_171705.1 zf-C2H2_6 4..28 CDD:404748 8/27 (30%)
zf-C2H2_6 160..185 CDD:404748 8/24 (33%)
zf-C2H2_6 208..231 CDD:404748 10/32 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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