DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and Ctcfl

DIOPT Version :10

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001342114.1 Gene:Ctcfl / 664799 MGIID:3652571 Length:646 Species:Mus musculus


Alignment Length:575 Identity:116/575 - (20%)
Similarity:184/575 - (32%) Gaps:228/575 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KQTSYKEDDLDRETTISKFDGNIEEAQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTFIIK 153
            |:...|..||:.|    |.:..::..:.|:...:|:|:..:.:.|...|.:     |.:...:..
Mouse    17 KEQKLKPGDLEEE----KEEDGVQRVEAQEGVVKEVEAENSCLLLEARAPV-----ESDRRILTL 72

  Fly   154 QS---EEEDEF----------HSVDLE-----------------LDIDNEIIINE-------EEA 181
            |:   |.:|..          ||.:|.                 ||.:.::.:..       ||.
Mouse    73 QTVHLESQDVHLQGLGWLSVPHSEELSGTVPEAEGILQLPSVLWLDPEPQLSLQHCVTVSIPEEL 137

  Fly   182 HEVEE--------------VAHEIEEVAHEIEEEDLLPHDKQEAQEEDFFKEDTMSDFDEHLDGA 232
            :..||              :|.|..|:..:::|...|  .|.|..|:|.......:|..|.....
Mouse   138 YPPEELQRIHFHLLRENVLMAEENPELTPDLDESTAL--KKPEEDEKDQLPPQGETDKREERLLL 200

  Fly   233 IEYIISDGEDQE-------------QDNESSGEYTV-------------------NIQCPSCPEK 265
            :|....:|:|.|             ||..::.:.:|                   :.||.:||..
Mouse   201 LEMKPKEGKDDEIVLTISHLSLEEQQDPPAANQTSVPGAKAAKPKRRRQTKGKPQSFQCDTCPFT 265

  Fly   266 FSSRRAYNVHTK-----REHFPGYVCDQCGKTLQSYS----------------------GFI--- 300
            .|....:|.|.|     |.|    :|..|.|..::.:                      .|:   
Mouse   266 SSKLSTFNRHIKIHSNERPH----LCHLCLKAFRTVTLLRNHVNTHTGTRPHKCRDCDMAFVTSG 326

  Fly   301 --------------------------------GHLQNHEPVKQFACPVCPERFSRKFRLKHHMAW 333
                                            .|:::|...:.|.|..|.......::||.||..
Mouse   327 ELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRT 391

  Fly   334 HSGETPYQCDVCSKRF-------------------------------------VH---------- 351
            ||||.||:|..|..||                                     ||          
Mouse   392 HSGEKPYECPTCHVRFTQSGTMKIHIAQKHGENVPKYECPHCATIIARKSDLRVHLRNLHSQSPE 456

  Fly   352 -------------KVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMRSHTGDKPFACPVCN 403
                         :.||.:|:..|.:| |:.:|:.|.:..:.:..|:.|||.|||:|||:|..||
Mouse   457 EMKCRYCPAGFHERYALIQHQRTHKNE-KKFKCKQCDYACKQERCLKAHMRMHTGEKPFSCLACN 520

  Fly   404 KRFSQMYNMKAHLREHESPG--TNRHRRFHCSKCTHTFINEQNYDAHVQRDDCTP 456
            |.|.|...:..|||::..|.  .|.|.   |.||...|....|...|  |..|.|
Mouse   521 KHFRQKQLLTVHLRKYHDPNFVPNLHL---CLKCDKRFSRWSNLQRH--RKKCDP 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 5/76 (7%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
SFP1 <336..419 CDD:227516 37/142 (26%)
C2H2 Zn finger 342..391 CDD:275368 18/108 (17%)
zf-H2C2_2 383..408 CDD:463886 15/24 (63%)
C2H2 Zn finger 399..419 CDD:275368 9/19 (47%)
C2H2 Zn finger 432..449 CDD:275368 5/16 (31%)
CtcflNP_001342114.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..38 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..195 9/36 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..257 3/34 (9%)
COG5048 <256..491 CDD:227381 42/239 (18%)
C2H2 Zn finger 259..279 CDD:275368 7/19 (37%)
C2H2 Zn finger 287..307 CDD:275368 3/19 (16%)
C2H2 Zn finger 315..333 CDD:275368 1/17 (6%)
C2H2 Zn finger 344..364 CDD:275368 1/19 (5%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..417 CDD:275368 4/16 (25%)
C2H2 Zn finger 460..480 CDD:275368 3/19 (16%)
zf-H2C2_5 486..510 CDD:404746 7/23 (30%)
C2H2 Zn finger 488..508 CDD:275368 6/19 (32%)
zf-H2C2_2 501..525 CDD:463886 15/23 (65%)
C2H2 Zn finger 516..534 CDD:275368 7/17 (41%)

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