DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and Repin1

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001073372.2 Gene:Repin1 / 58887 MGIID:1889817 Length:601 Species:Mus musculus


Alignment Length:198 Identity:68/198 - (34%)
Similarity:94/198 - (47%) Gaps:11/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 CPSCPEKFSSRRAYNVHTKREHF---PGYVCDQCGKTLQSYSGFIGHLQNHEPVKQFACPVCPER 320
            |..|...|...|...:| :|:|.   | :.|.:|||.....:..:.|.:.|...:.|||..|..|
Mouse   411 CSDCGRSFRLERFLRLH-QRQHTGERP-FACTECGKNFGKKTHLVAHSRVHSGERPFACEECGRR 473

  Fly   321 FSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLE 385
            ||:...|..|...|:.|.|:.|..|.|.|.||..|..|:.||..| |...|..||.....|::|.
Mouse   474 FSQGSHLAAHRRDHAPERPFVCPDCGKAFRHKPYLAAHRRIHTGE-KPYVCPDCGKAFSQKSNLV 537

  Fly   386 RHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKCTHTFINEQNYDAHVQ 450
            .|.|.|||::|:|||.|::.|||..|:..|.:.|...|.     |.|:.|..||.:|.....|.:
Mouse   538 SHRRIHTGERPYACPDCDRSFSQKSNLITHRKSHIRDGA-----FCCAICGQTFDDEDRLLMHQK 597

  Fly   451 RDD 453
            :.|
Mouse   598 KHD 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
zf-H2C2_2 327..351 CDD:290200 9/23 (39%)
C2H2 Zn finger 342..391 CDD:275368 19/48 (40%)
zf-H2C2_2 383..408 CDD:290200 12/24 (50%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 432..449 CDD:275368 5/16 (31%)
Repin1NP_001073372.2 C2H2 Zn finger 110..130 CDD:275368
C2H2 Zn finger 138..158 CDD:275368
C2H2 Zn finger 169..189 CDD:275368
C2H2 Zn finger 198..216 CDD:275368
C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 287..307 CDD:275368
zf-H2C2_2 299..324 CDD:290200
COG5048 <303..574 CDD:227381 59/165 (36%)
C2H2 Zn finger 315..335 CDD:275368
zf-H2C2_2 327..352 CDD:290200
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 411..431 CDD:275368 6/20 (30%)
zf-H2C2_2 424..446 CDD:290200 8/23 (35%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
zf-H2C2_2 451..476 CDD:290200 8/24 (33%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
zf-H2C2_2 507..532 CDD:290200 9/25 (36%)
C2H2 Zn finger 523..543 CDD:275368 7/19 (37%)
zf-H2C2_2 535..560 CDD:290200 12/24 (50%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
C2H2 Zn finger 579..599 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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