DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZIPIC and wdn

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster


Alignment Length:436 Identity:103/436 - (23%)
Similarity:168/436 - (38%) Gaps:79/436 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SSTICKKCCEKLARYHKSIQIARKLRGEILELIHSPYMSKDHKQTSYKEDDLDRET----TISKF 107
            ||.:|:   :.||....|             .:.|...|.:|..:.:....|..|.    |.|.|
  Fly   104 SSDVCR---DDLAATSSS-------------TVPSTLTSDNHSSSEFSVTFLRPEPPNAFTNSPF 152

  Fly   108 DGNIEEAQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTFIIKQSEEEDEFHSVDLELDIDN 172
                          ::..|.||:.    |..:..|...::|...:.||:.......:.....:..
  Fly   153 --------------KKTSSSGTST----PVKLSPEQLHQQHQLQMPQSQLLQRKPKLPAATAVRL 199

  Fly   173 EIIINE--EEAHEVEEVAHEIEEVAHEIEEEDLLPHD----KQEAQEEDFFKEDTM--------- 222
            ::...|  ||.|..|:|..::     |:.|.:|||..    :|....|......:|         
  Fly   200 KVFKEEPPEEKHPPEQVVTKV-----EVCESELLPPSFTIFQQAKSAESVADAASMPPPAASETK 259

  Fly   223 ------SDFDEHLDGAIEYIISDGEDQEQDNESSG-EYTVNIQCPSCPEKFSSRRAYNVHTKREH 280
                  :...:.||  ...::.:..|:...:|::. ...:..:|..|..:|........|.|...
  Fly   260 PLEVDPAPLHKCLD--CNGLLLETPDEVAKHEAAAHRLRLTYRCSECQREFELLAGLKKHLKTHR 322

  Fly   281 FPG-----YVCDQCGKTLQSYSGFIGHLQNHEPVKQFACPVCPERFSRKFRLKHHMAWHSGETPY 340
            ..|     ..|..|||.|:..|.:: |.:.|...|::.|.:|.::|.:|..|.||...||.|.||
  Fly   323 TEGRKDTWKKCPDCGKCLKLGSMWM-HRKIHSDNKKYQCDICGQKFVQKINLTHHARIHSSEKPY 386

  Fly   341 QCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMRSHTGDKPFACPVCNKR 405
            :|..|.|||..:..|.:|:..| ::|:...|:.||...:|:..|:.|...|...:||||.||:|.
  Fly   387 ECPECQKRFQERSHLQRHQKYH-AQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKS 450

  Fly   406 FSQMYNMKAHLREHESPGTNRHRRFHCSKCTHTFINEQNYDAHVQR 451
            |.....:|.|...|..     .|.|.|:.|...|.|..|:..|.:|
  Fly   451 FISNSKLKQHSNIHTG-----MRPFKCNYCPRDFTNFPNWLKHTRR 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
zf-H2C2_2 327..351 CDD:290200 13/23 (57%)
C2H2 Zn finger 342..391 CDD:275368 15/48 (31%)
zf-H2C2_2 383..408 CDD:290200 11/24 (46%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..449 CDD:275368 5/16 (31%)
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
RPB9 333..425 CDD:224510 33/93 (35%)
C2H2 Zn finger 333..352 CDD:275368 7/19 (37%)
zf-H2C2_2 344..369 CDD:290200 7/25 (28%)
zf-C2H2 358..380 CDD:278523 7/21 (33%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 372..395 CDD:290200 11/22 (50%)
zf-C2H2 386..408 CDD:278523 8/21 (38%)
C2H2 Zn finger 388..436 CDD:275368 15/48 (31%)
zf-H2C2_2 400..425 CDD:290200 7/25 (28%)
C2H2 Zn finger 416..433 CDD:275368 5/16 (31%)
zf-H2C2_2 429..453 CDD:290200 11/23 (48%)
C2H2 Zn finger 444..464 CDD:275368 7/19 (37%)
zf-H2C2_2 457..481 CDD:290200 8/28 (29%)
C2H2 Zn finger 472..493 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457201
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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