DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZIPIC and Zfx

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001102487.2 Gene:Zfx / 367832 RGDID:1562664 Length:799 Species:Rattus norvegicus


Alignment Length:533 Identity:122/533 - (22%)
Similarity:196/533 - (36%) Gaps:147/533 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SVRVPKDIHTDTVGHPPVLISELVLQCTRGTNYVLTEESSTICKKCCEKLARYHKSIQIARKLRG 73
            |:.|....|.:.|.|..|:.:|:|....  |..|::||  .:...|..:                
  Rat   139 SIHVSDVSHVEHVVHDSVVEAEIVTDPL--TADVVSEE--VLVADCASE---------------- 183

  Fly    74 EILELIHSPYMSKDHKQTSYKE------DD-------------LDRETTIS--KFDGNIEEA--- 114
            .:::....|...:|..:.:.::      ||             :|.||.|.  |.||...|.   
  Rat   184 AVIDANGVPVNQQDEDKANCEDYLMISLDDAGKIEHDGSSGLTMDNETEIDPCKVDGTCPEVIKV 248

  Fly   115 --QQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEH--------------------TFIIKQSEE 157
              .:.|..|.:|   |.||      .|||...|.||                    ..:....:|
  Rat   249 YIFKADPGEDDL---GGTV------DIVESEPENEHGVELLDPNNSMRVPREKMVYMAVNDTQQE 304

  Fly   158 EDEFHSVDLELDIDNEIIINEEEAHEVEEVAHEIEEVAHEIEEED-----LLPHDKQEAQEEDFF 217
            |:|.:..::..::..|:|:.||:|......|      .||.:.||     .:|.....|...:  
  Rat   305 EEELNVAEIADEVYMEVIVGEEDAAAAAAAA------VHEQQVEDNEMKTFMPIAWAAAYGNN-- 361

  Fly   218 KEDTMSDFDEHLDGAIEYIISDGEDQEQDNESSGEYTVNIQCPSCPEKFSSRR---AYNVHTKRE 279
                 ||..|:.:|....::       ..:||:|...:..|.|....:..||:   |..:.....
  Rat   362 -----SDGIENRNGTASALL-------HIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGH 414

  Fly   280 HFPGYVCDQCGKTLQSYSGFI-GHLQNHE---PVKQFACPVCPERFSRKFRLKHHMAWH----SG 336
            ....|.|..|||..:| .||: .|::||.   ..|::.|..|....::|..|.:|:..|    ..
  Rat   415 PLTVYPCMICGKKFKS-RGFLKRHMKNHPEHLAKKKYRCTDCDYTTNKKISLHNHLESHKLTSKA 478

  Fly   337 ETPYQCDVCSKRFVHKVALYKHKMIHDSE--TKRLECQVCGFKT--------------------- 378
            |...:||.|.|.|.|..||:.|||:|..:  .|..:|:.|.::|                     
  Rat   479 EKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 543

  Fly   379 --------RTKAHLERHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKC 435
                    |..:.|::|||.|||:||:.|..|..|.:...|:|.|::...|    :...|.|..|
  Rat   544 CVECGKGFRHPSELKKHMRIHTGEKPYECQYCEYRSADSSNLKTHVKTKHS----KEMPFKCDIC 604

  Fly   436 THTFINEQNYDAH 448
            ..||.:.:....|
  Rat   605 LLTFSDTKEVQQH 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 8/20 (40%)
C2H2 Zn finger 314..334 CDD:275368 5/19 (26%)
zf-H2C2_2 327..351 CDD:290200 9/27 (33%)
C2H2 Zn finger 342..391 CDD:275368 21/79 (27%)
zf-H2C2_2 383..408 CDD:290200 12/24 (50%)
C2H2 Zn finger 399..419 CDD:275368 6/19 (32%)
C2H2 Zn finger 432..449 CDD:275368 5/17 (29%)
ZfxNP_001102487.2 Zfx_Zfy_act 71..404 CDD:398398 63/313 (20%)
ROS_MUCR <371..>451 CDD:418699 20/87 (23%)
C2H2 Zn finger 421..441 CDD:275368 8/20 (40%)
C2H2 Zn finger 452..476 CDD:275368 6/23 (26%)
C2H2 Zn finger 484..504 CDD:275368 11/19 (58%)
COG5048 537..>674 CDD:227381 23/85 (27%)
C2H2 Zn finger 544..564 CDD:275368 5/19 (26%)
C2H2 Zn finger 572..591 CDD:275368 6/18 (33%)
C2H2 Zn finger 629..650 CDD:275368
C2H2 Zn finger 658..678 CDD:275368
zf-C2H2 713..735 CDD:395048
C2H2 Zn finger 715..735 CDD:275368
zf-H2C2_2 727..751 CDD:404364
C2H2 Zn finger 743..764 CDD:275368
C2H2 Zn finger 772..792 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.