DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and REPIN1

DIOPT Version :10

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001374966.1 Gene:REPIN1 / 29803 HGNCID:17922 Length:626 Species:Homo sapiens


Alignment Length:198 Identity:68/198 - (34%)
Similarity:95/198 - (47%) Gaps:11/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 CPSCPEKFSSRRAYNVHTKREHFPG---YVCDQCGKTLQSYSGFIGHLQNHEPVKQFACPVCPER 320
            |..|...|...|....| :|:| .|   :.|.:|||.....:..:.|.:.|...:.|||..|..|
Human   436 CDDCGRSFRLERFLRAH-QRQH-TGERPFTCAECGKNFGKKTHLVAHSRVHSGERPFACEECGRR 498

  Fly   321 FSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLE 385
            ||:...|..|...|:.:.|:.|..|.|.|.||..|..|:.||..| |...|..||.....|::|.
Human   499 FSQGSHLAAHRRDHAPDRPFVCPDCGKAFRHKPYLAAHRRIHTGE-KPYVCPDCGKAFSQKSNLV 562

  Fly   386 RHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKCTHTFINEQNYDAHVQ 450
            .|.|.|||::|:|||.|::.|||..|:..|.:.|...|.     |.|:.|..||.:|:...||.:
Human   563 SHRRIHTGERPYACPDCDRSFSQKSNLITHRKSHIRDGA-----FCCAICGQTFDDEERLLAHQK 622

  Fly   451 RDD 453
            :.|
Human   623 KHD 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
SFP1 <336..419 CDD:227516 33/82 (40%)
C2H2 Zn finger 342..391 CDD:275368 19/48 (40%)
zf-H2C2_2 383..408 CDD:463886 12/24 (50%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 432..449 CDD:275368 6/16 (38%)
REPIN1NP_001374966.1 C2H2 Zn finger 118..138 CDD:275368
C2H2 Zn finger 146..166 CDD:275368
C2H2 Zn finger 177..197 CDD:275368
COG5048 <197..371 CDD:227381
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 238..258 CDD:275368
COG5048 292..599 CDD:227381 58/165 (35%)
C2H2 Zn finger 297..317 CDD:275368
C2H2 Zn finger 325..345 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
C2H2 Zn finger 436..456 CDD:275368 6/20 (30%)
C2H2 Zn finger 464..484 CDD:275368 5/19 (26%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 8/19 (42%)
C2H2 Zn finger 548..568 CDD:275368 7/19 (37%)
C2H2 Zn finger 576..596 CDD:275368 8/19 (42%)
C2H2 Zn finger 604..624 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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