DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and znf-782

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:353 Identity:90/353 - (25%)
Similarity:127/353 - (35%) Gaps:112/353 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 DEFHSVDLELDIDNEIIINEEEAHEVE-EVAHEIEEVAHEIEEEDLLPHDKQEAQEEDFFKEDTM 222
            |:.|..|.|          |||..|.| |:..|.||...|:||.                     
 Worm    17 DDIHMKDPE----------EEEFEEYEDELLEEEEEFDEELEEL--------------------- 50

  Fly   223 SDFDEHLDGAIEYIISDG--EDQEQDNESSGEY-TVNIQCPSCPEKFSSRRAYNVHTKREHFPGY 284
                |:.|.| ..::|.|  ......|.|.|.. .:.:|.||  :...|..:.....::.|    
 Worm    51 ----ENSDSA-SSLVSAGSPHGSSSSNGSHGSSPPLQVQSPS--QGSGSSGSPTGQPEKRH---- 104

  Fly   285 VCDQCGKTLQSYSGFIGHLQNHEPVKQFACPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRF 349
            :|..|||....:|....|.::|...|.:.|..|.:.|::|..|:.|...|:||.||:|..|.|.|
 Worm   105 ICTVCGKGFSYFSILESHKRSHTGEKPYNCHFCQKTFAQKATLQVHERTHTGERPYKCRYCEKTF 169

  Fly   350 -------VHK----------------------VALYKHKMIHDSETKRLECQVC----GFKTRTK 381
                   ||:                      .|||.||..|..:|.|  |..|    ..|...|
 Worm   170 AQYGTKTVHEKSAHLGIRNYKCPKCDKLLSSPSALYTHKKTHGDKTFR--CDFCPKTFALKNYLK 232

  Fly   382 AH--------------------------LERHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHE 420
            .|                          |:.|:|:|||::|:.|..|.|.|:...|:::|.|.|.
 Worm   233 LHVKQVHEQNERKHVCVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCPKAFASQGNLQSHERTHT 297

  Fly   421 SPGTNRHRRFHCSKCTHTFINEQNYDAH 448
            .     .|.:.|..|..|||.:....||
 Worm   298 G-----ERPYSCQFCQRTFIQKSQLTAH 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
zf-H2C2_2 327..351 CDD:290200 11/30 (37%)
C2H2 Zn finger 342..391 CDD:275368 22/107 (21%)
zf-H2C2_2 383..408 CDD:290200 12/50 (24%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..449 CDD:275368 7/17 (41%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 6/19 (32%)
zf-H2C2_2 119..143 CDD:290200 6/23 (26%)
C2H2 Zn finger 134..154 CDD:275368 6/19 (32%)
zf-H2C2_2 147..171 CDD:290200 11/23 (48%)
C2H2 Zn finger 162..180 CDD:275368 6/17 (35%)
COG5048 <187..404 CDD:227381 36/141 (26%)
C2H2 Zn finger 191..211 CDD:275370 5/19 (26%)
C2H2 Zn finger 218..239 CDD:275368 5/20 (25%)
C2H2 Zn finger 248..268 CDD:275368 3/19 (16%)
zf-H2C2_2 260..285 CDD:290200 11/24 (46%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
zf-H2C2_2 288..313 CDD:290200 9/29 (31%)
C2H2 Zn finger 304..324 CDD:275368 7/17 (41%)
C2H2 Zn finger 386..403 CDD:275368
C2H2 Zn finger 424..441 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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