DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and scrt-1

DIOPT Version :10

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_491001.2 Gene:scrt-1 / 183848 WormBaseID:WBGene00016948 Length:178 Species:Caenorhabditis elegans


Alignment Length:128 Identity:42/128 - (32%)
Similarity:62/128 - (48%) Gaps:46/128 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 PVKQFACPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQ 372
            ||.|  |.||.:||||::.|:.|:..|:||.|:||::|||||.                      
 Worm    92 PVCQ--CKVCGKRFSRQWLLQGHLRTHTGEKPFQCEICSKRFA---------------------- 132

  Fly   373 VCGFKTRTKAHLERHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKC 435
                   .|::|..|:::|:|.||..||.|.|.|:    :|::|.:||.           |||
 Worm   133 -------DKSNLRAHIQTHSGTKPHKCPRCGKSFA----LKSYLSKHEE-----------SKC 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..334 CDD:275368 9/19 (47%)
SFP1 <336..419 CDD:227516 24/82 (29%)
C2H2 Zn finger 342..391 CDD:275368 9/48 (19%)
zf-H2C2_2 383..408 CDD:463886 11/24 (46%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..449 CDD:275368 3/4 (75%)
scrt-1NP_491001.2 zf-C2H2 94..116 CDD:395048 10/23 (43%)
C2H2 Zn finger 96..116 CDD:275368 9/19 (47%)
zf-H2C2_2 109..132 CDD:463886 12/22 (55%)
C2H2 Zn finger 124..144 CDD:275368 9/48 (19%)
zf-H2C2_2 136..160 CDD:463886 10/23 (43%)
C2H2 Zn finger 152..168 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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