DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and CTCFL

DIOPT Version :10

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001255972.1 Gene:CTCFL / 140690 HGNCID:16234 Length:700 Species:Homo sapiens


Alignment Length:463 Identity:106/463 - (22%)
Similarity:182/463 - (39%) Gaps:102/463 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ISELVLQCTRGTNYVLTEESSTICKKCCEKLARYHKSIQIARKLRGEILELIHSPYMSKDHKQTS 92
            |.||.|...:|   :..||...:|::                                |||:..|
Human    16 IKELELMPEKG---LKEEEKDGVCRE--------------------------------KDHRSPS 45

  Fly    93 YKEDDLDRETTISKFDGNIEEAQQQ-----DEEEQELESVGTTVTLVGPAGIVEE-----VAEEE 147
                :|:.|.|...|..::.|.:.:     .||.::......||.....|..:::     :.::|
Human    46 ----ELEAERTSGAFQDSVLEEEVELVLAPSEESEKYILTLQTVHFTSEAVELQDMSLLSIQQQE 106

  Fly   148 HTFIIKQSE-------EEDEFHSVD--LELDIDNEIIINEE----EAHEVEE---VAHEIEEVA- 195
            ...::.|..       ||....|:.  :.:.|..|:...:|    :.|.:||   ||.|..::| 
Human   107 GVQVVVQQPGPGLLWLEEGPRQSLQQCVAISIQQELYSPQEMEVLQFHALEENVMVASEDSKLAV 171

  Fly   196 ------------HEIEEEDLLPHDKQEAQEEDFFKEDTMSDFDEHLDGAIEYIISDGEDQEQDNE 248
                        .|.|:..||    .|..:|..|..:|||. ||..|..:..:.:...::::|..
Human   172 SLAETTGLIKLEEEQEKNQLL----AERTKEQLFFVETMSG-DERSDEIVLTVSNSNVEEQEDQP 231

  Fly   249 SSGEYTVNIQCPSCPEKFSSRRAYNVHTKREHFPGYVCDQCGKTLQSYSGFIGHLQNHEPVKQFA 313
            ::|:        :..||..|.:  |....:.....:.||.|..|....|.|..|::.|...|...
Human   232 TAGQ--------ADAEKAKSTK--NQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHL 286

  Fly   314 CPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKT 378
            |.:|.:.|.....|::|:..|:|..||:|:.|:..||....|.:|:....:..|..:|.:|.:.:
Human   287 CHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYAS 351

  Fly   379 RTKAHLERHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREH--ESPGTNRHRRFHCSKCTHTFIN 441
            ...:.|:||:|||||::||.|..|:......|.:|.|:|.|  |.|       :.|..|...|..
Human   352 VEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKP-------YECHICHTRFTQ 409

  Fly   442 EQNYDAHV 449
            ......|:
Human   410 SGTMKIHI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 5/19 (26%)
SFP1 <336..419 CDD:227516 28/82 (34%)
C2H2 Zn finger 342..391 CDD:275368 13/48 (27%)
zf-H2C2_2 383..408 CDD:463886 12/24 (50%)
C2H2 Zn finger 399..419 CDD:275368 6/19 (32%)
C2H2 Zn finger 432..449 CDD:275368 3/16 (19%)
CTCFLNP_001255972.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..55 11/69 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..250 6/38 (16%)
COG5048 <259..403 CDD:227381 47/150 (31%)
C2H2 Zn finger 259..279 CDD:275368 7/19 (37%)
C2H2 Zn finger 287..307 CDD:275368 5/19 (26%)
C2H2 Zn finger 315..333 CDD:275368 6/17 (35%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
SUF4-like <392..>432 CDD:411020 7/33 (21%)
C2H2 Zn finger 400..421 CDD:411020 4/18 (22%)
C2H2 Zn finger 400..417 CDD:275368 3/16 (19%)
C2H2 Zn finger 430..448 CDD:275368
SUF4-like 459..>492 CDD:411020
C2H2 Zn finger 460..485 CDD:411020
C2H2 Zn finger 460..480 CDD:275368
C2H2 Zn finger 488..508 CDD:275368
C2H2 Zn finger 516..534 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 569..630
Blue background indicates that the domain is not in the aligned region.

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