DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and LOC103694540

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_038956652.1 Gene:LOC103694540 / 103694540 RGDID:9203794 Length:781 Species:Rattus norvegicus


Alignment Length:553 Identity:120/553 - (21%)
Similarity:189/553 - (34%) Gaps:151/553 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ICQFSVRVPKD------IHTDTVGHPPVLISELVLQCTRGTNYVLTEESSTICKKCCEKLARYHK 63
            |...|:.:|:.      ||...|||...:|.:.:::....|:.:..:.|..:...|..:      
  Rat   119 ITSTSLTMPEHILMSEAIHVSDVGHIEQVIHDSLVETEVITDPLTADISEILVTDCASE------ 177

  Fly    64 SIQIARKLRGEILELIHSPYMSKDHKQTSYKEDDLDRETTISKFDGNIEEAQQQDEEEQELESVG 128
                      .:|:....|...:|  .|....||.   ..||..|....|.:...|.....||..
  Rat   178 ----------AVLDSSGMPLEQQD--DTKVNRDDY---LMISLDDAGKTENEGSSEVTTNAESES 227

  Fly   129 TTVTLVGPAGIVEEVAEEEHTFIIKQSEEEDEF-HSVDL---ELDIDNEI-IINEEEAHEV--EE 186
                  .|..:.|...|....:|.|...|||:. .:||:   :.|..||. :|::..:..|  :.
  Rat   228 ------DPYKLNETSPEVIKVYIFKADPEEDDVGETVDIVESKTDNGNEAEVIDQSSSIYVPRDN 286

  Fly   187 VAHEIEEVAHEIEEEDLLPHDKQEAQEEDFFKEDTMSDFDEH---------------LDGAIEYI 236
            |...:.:...|.|:..::..|:...        ||.:|..||               :..|..|.
  Rat   287 VYMPVSDSQKEEEDTKVIVGDEDAG--------DTAADTSEHEQQMDDSEIKAAFLPIAWAAAYD 343

  Fly   237 ISDGEDQEQD---------NESSGEYTVNIQ------------------------------CPSC 262
            .:..|.:||:         |||.|...|:.|                              |..|
  Rat   344 NNSDEIEEQNVTASAVLHQNESGGLDRVHKQKAKKKKRPESKQYQTAIIVAPDGQTLIVYPCMFC 408

  Fly   263 PEKFSSRRAYNVHTKREHFPGYV--------------------------------------CDQC 289
            .:||.::.....|.|  :.|.|:                                      ||.|
  Rat   409 GKKFKTKSFLKRHIK--NHPEYLAKKKYHCTDCDYSTNKKISLHNHMESHKLTIKTEKTTECDDC 471

  Fly   290 GKTLQSYSGFIGHLQNHEPV-KQFACPVCPERFSRKFRLKHH-MAWHSGETPYQCDVCSKRFVHK 352
            ||.|........|.:..|.| |.:.|..|....:.:..|.|| :|.||.:.|:.|..|.|.|.|.
  Rat   472 GKHLSHAGTLCTHKKEKEKVSKTYKCKFCDYETAEQTSLNHHLLAVHSKKYPHVCVECGKGFRHP 536

  Fly   353 VALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMRS-HTGDKPFACPVCNKRFSQMYNMKAHL 416
            ..|.||..:|..| |..:||.|.:|:...::|:.|::: |:.|.|..|.:|...||.....:.|.
  Rat   537 SELKKHIRVHTGE-KPYQCQYCEYKSADSSNLKTHIKTKHSKDIPLKCGICLMTFSDTKEAQQHA 600

  Fly   417 REHESPGTNRHRRFHCSKCTHTFINEQNYDAHV 449
            ..|:     .:|...||.|.|...|..:...|:
  Rat   601 LIHQ-----ENRTHQCSYCNHKSSNSSDLKRHI 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 6/20 (30%)
zf-H2C2_2 327..351 CDD:290200 11/24 (46%)
C2H2 Zn finger 342..391 CDD:275368 17/49 (35%)
zf-H2C2_2 383..408 CDD:290200 8/25 (32%)
C2H2 Zn finger 399..419 CDD:275368 5/19 (26%)
C2H2 Zn finger 432..449 CDD:275368 5/16 (31%)
LOC103694540XP_038956652.1 Zfx_Zfy_act 68..388 CDD:398398 60/303 (20%)
zf-C2H2 403..425 CDD:395048 6/23 (26%)
C2H2 Zn finger 405..425 CDD:275368 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 0/19 (0%)
C2H2 Zn finger 468..484 CDD:275368 6/15 (40%)
C2H2 Zn finger 497..518 CDD:275368 6/20 (30%)
COG5048 508..>694 CDD:227381 40/127 (31%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:404364 10/24 (42%)
C2H2 Zn finger 554..573 CDD:275368 6/18 (33%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..632 CDD:275368 6/18 (33%)
C2H2 Zn finger 640..689 CDD:275368
zf-C2H2 695..717 CDD:395048
C2H2 Zn finger 697..717 CDD:275368
zf-H2C2_2 709..733 CDD:404364
C2H2 Zn finger 725..746 CDD:275368
C2H2 Zn finger 754..774 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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