DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIPIC and znf276

DIOPT Version :9

Sequence 1:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_002933710.1 Gene:znf276 / 100486887 XenbaseID:XB-GENE-983669 Length:570 Species:Xenopus tropicalis


Alignment Length:355 Identity:92/355 - (25%)
Similarity:136/355 - (38%) Gaps:100/355 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GIVEEVAE--EEHTFIIK----------QSEEE---------DEFHSVDLELDIDNEIIINEEEA 181
            ||::.|.|  ..|.:|::          |.|||         :..|.::.....|:|  .|..:.
 Frog   200 GIIQAVWECGGGHDYIMQPDSDCISSPAQPEEEMSPEQGLSGNGIHRINTRTIPDSE--YNPPDR 262

  Fly   182 HEVEEVAHEIEEVAHEIEEE-----DLLPHDKQEAQE--------EDFFKEDTMSDFDEHLDGAI 233
            .....|..:...|.:.|.:.     .|...|..:.|:        .|..||| .||         
 Frog   263 INTASVLLDTCVVVNHITQNRTPSPPLAAPDSSQGQDCRNSTLASNDHSKED-CSD--------- 317

  Fly   234 EYIISDGEDQEQDNESSGEYTVNIQCPSCPEKFS---SRRAYNVHTKRE--------HF------ 281
               :|||:.|.|:....|      |.||..:.|.   ::|  |...|||        .|      
 Frog   318 ---LSDGDFQSQEEGEPG------QQPSSDDSFEPCIAKR--NPQKKREPRKSQKLTEFREKKKP 371

  Fly   282 ---PG--------------YVC--DQCGKTLQSYSGFIGHL-QNHEPVKQFAC--PVCPERFSRK 324
               ||              |.|  ..|....:...|...|: ::||.|::..|  |.|.:.|...
 Frog   372 GPKPGWKKIKREREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMID 436

  Fly   325 FRLKHHMAW-HSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHM 388
            ..|:.|:.. |:.|..:.||.|.:.|..:..|..|:|.| |..|.|:|:||||:.|.:|.|:.||
 Frog   437 RYLQRHVKLIHTEERNHICDQCGQAFKQRKHLSVHQMRH-SGAKPLQCEVCGFQCRQRASLKYHM 500

  Fly   389 RSH--TGDKPFACPVCNKRFSQMYNMKAHL 416
            ..|  ..|..|||..|.|||.:.:|:..|:
 Frog   501 TKHKAEADLEFACDQCAKRFEKAHNLNVHM 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 4/22 (18%)
C2H2 Zn finger 314..334 CDD:275368 6/22 (27%)
zf-H2C2_2 327..351 CDD:290200 8/24 (33%)
C2H2 Zn finger 342..391 CDD:275368 21/48 (44%)
zf-H2C2_2 383..408 CDD:290200 12/26 (46%)
C2H2 Zn finger 399..419 CDD:275368 7/18 (39%)
C2H2 Zn finger 432..449 CDD:275368
znf276XP_002933710.1 SFP1 <320..476 CDD:227516 41/164 (25%)
C2H2 Zn finger 427..447 CDD:275368 5/19 (26%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
C2H2 Zn finger 483..503 CDD:275368 10/19 (53%)
C2H2 Zn finger 513..530 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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