DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axn and rgs12

DIOPT Version :10

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_012811187.1 Gene:rgs12 / 779463 XenbaseID:XB-GENE-992792 Length:1401 Species:Xenopus tropicalis


Alignment Length:740 Identity:160/740 - (21%)
Similarity:254/740 - (34%) Gaps:203/740 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NWARTLNHLLEDRDGVELFKKYVEEEAPAYNDHLNFYFACEGLKQQT--DPEKIKQIIGAIY-RF 111
            :||.:...||:|..||..|.:::::|..  .:::.|:.:||...:..  |..::......|: :|
 Frog   701 SWAVSFERLLQDPVGVRYFTEFLKKEFS--EENILFWQSCEYFSRIPIHDKNELSYRAREIFNKF 763

  Fly   112 LRK---------SQLSISDDLRAQIKAIKTNPEIPLSPHIFDPMQRHVEVTIRDNIYPTFLCSEM 167
            |..         ||..::||       :...|.    |.:|...|..:...::.:.|..||.|.:
 Frog   764 LSSKATTPVNIDSQAHLADD-------VLNAPH----PDMFKEQQLQIFNLMKFDSYTRFLKSHL 817

  Fly   168 Y----ILYIQQMSAQQERCTSSGATGSGSAGSSGS---------------GGSSLAGACALPPTT 213
            |    :..::..|....:...|..|...|..|..|               .|.||        ..
 Frog   818 YQECMLAEVEGRSLPDPQEVPSSPTSKHSISSERSNISTPKKQQLSKKNRSGRSL--------NE 874

  Fly   214 ASGKQQLPQLVPPGAFINLPVSSVSGP----------PAGTCSASGSVYGPSTSASSSGSISATD 268
            .||.:...:....|||.:...|...|.          .|..||....  |.|....|.||:|::.
 Frog   875 ESGGEDDNERKKKGAFFSWSRSKSIGKSQKKRENGEISAADCSHING--GNSRRRGSQGSVSSSA 937

  Fly   269 TLP-------------RSSTLPTLHE------DSVLSLCDDFEKVQMQEGGGSLG---SG----- 306
            :|.             .||.:.:|||      ...:||.|......:.:.|.|:.   ||     
 Frog   938 SLELINCGTNGNALEFESSRVSSLHEKEKVSKQCYISLPDGSSCAMVVKSGLSIKDMLSGLCDKH 1002

  Fly   307 --SVGA------GARAP-----DYPIRLTRDLLIATQKR---RLEIRPPG-AHGYVYNPSTTNT- 353
              ::.|      |...|     |..|..:|||.|  :||   ||::.|.. :.|....|:...| 
 Frog  1003 GFNIAAVDLFLIGGNKPLVLSQDSSILESRDLRI--EKRTLFRLDLVPINRSVGLKAKPTKPVTE 1065

  Fly   354 -------SYVPN-----SRVDSERASVSSGGRTDSDTMSISSCSMDGRPYIQRRHSSTESKAIRQ 406
                   .|..|     :|:..|...:..|       :.||  ::||:..:.....:...|. :|
 Frog  1066 VLRPVVAKYGLNLTELVARLSGEHEPLDLG-------LPIS--NLDGQRVVLEEKENLRGKE-KQ 1120

  Fly   407 SAMANKETNTFQVIPRTQRLHSNEHRPLKEEELVSLLIPKLEEVKRKRDLEERARERN------- 464
            .|...|.:.|....||:.. .:.|.|||.:...:.|   |.|..|..||    ||..|       
 Frog  1121 KAPVLKPSPTVISGPRSPS-SAGEDRPLVKSASIRL---KRENGKGSRD----ARLLNKDEPVVR 1177

  Fly   465 PGAALLTNERSSASDRAFAEAIREKFALDEDN---DQDILDQHVSRVWKD---QTPHRSPGTMSP 523
            ||     ..|....:...|||..|..:..:.|   ||..|.:....|..|   .||..|..: :|
 Frog  1178 PG-----RRRQQKINLDEAEAFFEMISKAQSNRAEDQRGLLRKEDLVLPDFLRLTPSESVSS-TP 1236

  Fly   524 CPPIPSRRRTATHDSGMVSDGAMSLSGHSMKHSKSMPDHSSCSRKLTN----KWPSMNTDSGISM 584
            .....:.:|....|||                     |.::.|.:..|    :.|...||..:..
 Frog  1237 AGSNSNNKRPGRRDSG---------------------DRAAPSSRAMNGTRQETPPKCTDRPLKS 1280

  Fly   585 FSADTVTK--YKDASSRSG----SSTASKLEEAKRRLEDEPRRSRRYAQPPM--------QHLSQ 635
            ...|...|  :..|.||..    ::..|.:...:.|  ::|.:.|.....|:        ::::.
 Frog  1281 GGLDRRDKPDFLQAGSRKPYVPFNAPLSPIPHVQER--NKPGKERHSRDLPLDNIQTIEDENVAD 1343

  Fly   636 QPLASFSSSSSGGSISLPHQPPPLP 660
            ..|.:....||..|..||  |||.|
 Frog  1344 LTLVAEGDISSPNSTLLP--PPPSP 1366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:470619 27/130 (21%)
Axin_b-cat_bind 495..530 CDD:462616 10/40 (25%)
DIX 665..741 CDD:459936
rgs12XP_012811187.1 PDZ_RGS12-like 21..96 CDD:467194
PTB_RGS12 225..355 CDD:269984
RGS_RGS12 706..820 CDD:188696 27/126 (21%)
RGS12_us1 826..948 CDD:465199 26/131 (20%)
RBD1_RGS12 969..1038 CDD:340656 16/70 (23%)
RBD2_RGS12 1039..1111 CDD:340658 16/80 (20%)
RGS12_us2 1113..1184 CDD:435461 23/84 (27%)
GoLoco 1192..1213 CDD:460481 6/20 (30%)
RGS12_usC 1240..1388 CDD:465198 30/152 (20%)
Blue background indicates that the domain is not in the aligned region.

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