DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and rgs12a

DIOPT Version :10

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_699097.5 Gene:rgs12a / 570516 ZFINID:ZDB-GENE-030131-2614 Length:1371 Species:Danio rerio


Alignment Length:870 Identity:175/870 - (20%)
Similarity:274/870 - (31%) Gaps:298/870 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GIRKHDDNECSGPRPPVPGEESRVKKMTEGVADTSKNSS-PSYLN-----------WARTLNHLL 59
            |:::||   ||                  .|:....|.| ||..|           ||.:...||
Zfish   643 GVQRHD---CS------------------SVSSLDSNGSLPSVTNHCRFTERRVALWAVSFERLL 686

  Fly    60 EDRDGVELFKKYVEEEAPAYNDHLNFYFACEGLKQ--QTDPEKIKQIIGAIY-RFL-RKSQLSIS 120
            :|..||..|.:::::|..  .:::.|:.|||...|  :.|.:::.|....|| ||| .|:.:.::
Zfish   687 QDPVGVRYFSEFLKKEFS--EENILFWQACECFSQVPEHDKKQLSQKAKEIYNRFLSSKATMPVN 749

  Fly   121 DDLRAQI-KAIKTNPEIPLSPHIFDPMQRHVEVTIRDNIYPTFLCSEMYILYIQQMSAQQERCTS 184
            .|.:||: ..:.|.|:    |::|...|..:...::.:.|..||.|   .||.:.|.|:.|    
Zfish   750 IDSQAQLADDVLTAPQ----PNMFKQPQLQIFNLMKMDSYARFLKS---TLYQECMLAEVE---- 803

  Fly   185 SGATGSGSAGSSGSGGSSLAGACALPPTTASGKQQLPQLVPPGAFINLPVSSVSGPPAGTCS--- 246
                           |..|...|.:|.:.|..|.   ......:..:.|......|..|..|   
Zfish   804 ---------------GRPLPDPCPIPCSPAPSKH---SFTSDRSTFSTPKKENRKPKTGRSSDDL 850

  Fly   247 ----------------------------------------------ASGSVYGPSTSASSS---- 261
                                                          :||:....:||.|..    
Zfish   851 REKHSDKKNGFFSWYRYPSIGKGQKKREAPDLPYHCNGRRESQGSLSSGASQELNTSCSGGKNEQ 915

  Fly   262 ----GSISATD------------TLP--RSSTLPTLHEDSV----LSLCD----DFEKVQMQEGG 300
                ||..|.|            |||  .|.::|.....|:    |.||.    :...|.:...|
Zfish   916 CELRGSSCALDKERERCSRTCTVTLPDGSSCSIPLRQGASIRQVLLELCQKQHINLAAVDLFLTG 980

  Fly   301 GS----LGSGSVGAGARAPDYPIRLTR------DLLIATQKRRLEIRPPGAHGYVYNPSTTNTSY 355
            |.    |...|:...:|    .:||.:      ||:...:...|:.:|......|..|.......
Zfish   981 GEKPLVLDQDSITLSSR----ELRLEKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVAKYGL 1041

  Fly   356 VPNSRVDSERASVSSGGRTDSDTMSISSCSMDGRPYIQRRHSSTESKAIRQSAMANKETNTFQVI 420
            .....|    |.:|  |.|:...:.:...::||...:..|  :..:||.:...:.:|.....:..
Zfish  1042 QLGDLV----ARIS--GETEVLDLGVPISNLDGLRVVLER--ADPAKAEKSKTLNSKTPAAKKGF 1098

  Fly   421 PRTQRLHSNEHRPLKEEELVSLLIPKLEEVKRKRDLEERARERNPGAALLTNERSSASDRAFAEA 485
            || :|..::..:|||.:  |....|:....:||:..:....|......||:..:||..|......
Zfish  1099 PR-ERDDNSTVKPLKAD--VEDKHPRTAASERKKGKKNHIDETEEFFELLSRAQSSRVDDQRGLL 1160

  Fly   486 IREKFALDEDNDQDILDQHVSRVWKDQTPHRSPGTMSPCPPIPSRRRTATHDSGMVSDGAMSLSG 550
            .:|...|     .|.|     ||..|..|...|...:|....|....|.            |.:.
Zfish  1161 RKEDLVL-----PDFL-----RVNNDPKPQSPPSCSTPTSHKPGHTTTT------------STNP 1203

  Fly   551 HSMKHSKSMPDHSSCSRKLTNKWPSMNTDSGISMFSADTVTKYKDASSRSGSSTASKLEEAKRRL 615
            |.       |..|.|           |.....:.|||......:.|.:|.        :|.:..|
Zfish  1204 HP-------PKPSPC-----------NGHQASAPFSAPLSPILRSAGARE--------QEEEEGL 1242

  Fly   616 EDEPRRSRRYAQPPMQHLSQQPLASFSSSSSGGSISLPHQ---PPPLPAKPPE---TIVVFSFCE 674
            .|                        .:..:.|.||.|:.   |||.|..||.   ::...:|..
Zfish  1243 GD------------------------LTLVAEGDISSPNSTLLPPPPPVSPPPYDGSLAEANFTP 1283

  Fly   675 EPVPYRIKIPGT-----------------QPTLR----------QFKDYLP---------RRGHF 703
            .|.     :.||                 ||.||          .|:.|..         |.|  
Zfish  1284 PPA-----VHGTGTEEENTSTSAVNSSTAQPDLRVRDKGVTLEDSFEGYAAELRQCQNKMRNG-- 1341

  Fly   704 RFFFKTHCEDPDSPVIQEEIVNDSD 728
             .:..|....|.|.|::   ||:||
Zfish  1342 -VYPSTDAPRPLSGVLE---VNESD 1362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:470619 32/119 (27%)
Axin_b-cat_bind 495..530 CDD:462616 9/34 (26%)
DIX 665..741 CDD:459936 20/103 (19%)
rgs12aXP_699097.5 None

Return to query results.
Submit another query.