DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and grid2ipb

DIOPT Version :9

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_009304908.1 Gene:grid2ipb / 559717 ZFINID:ZDB-GENE-040724-161 Length:1383 Species:Danio rerio


Alignment Length:538 Identity:108/538 - (20%)
Similarity:176/538 - (32%) Gaps:159/538 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 GTCSASGSVYGPSTSASSSGSISATDTLPRSSTLPTLHEDSVLSLCDDFEKVQMQEGGGSLGSGS 307
            |..||...|...:...|||..:|.|.           |:::|.....|...:     |..||.|:
Zfish   531 GFKSAEPEVGAETHRRSSSMRVSGTS-----------HKNTVRERSSDDCII-----GTHLGMGT 579

  Fly   308 -----------VGAGARAPD-----------------YPIRLTRDLLIATQKRRLEIRPPGAHGY 344
                       .|.|...|:                 ||::.::.|...:.        |.|.|.
Zfish   580 FTDPVTPEERQCGDGTSFPESPDLSHMTGVYTELGNVYPVKSSQSLQSHSS--------PRAAGM 636

  Fly   345 VYNPSTTNTSYVPNSRVDSERASVS-------SGGRTDSDTMSISS-CSMDGRPYIQRRHSSTES 401
            ....|.|.|....:|...:.::.:|       .|.:.::...:::| .|:|..||:     |.:|
Zfish   637 GLAESNTYTQSFTHSTAGNRKSGLSLTWTDSFPGPQFETYQQTVASPDSVDSNPYV-----SLDS 696

  Fly   402 KAIRQSAMANKETNTFQVIPRTQRLHSNEHRPLKEEELVSLLIPKLEEVKRK-----------RD 455
            ..  .|.:.:.|.:.   :|:.::|.:.. ||.:..:....|....|::..:           .|
Zfish   697 PP--ASPLPSDELSP---LPQRRKLFTFS-RPPRSRDTDKFLDALSEQLGHRVNIVDDFKGGEND 755

  Fly   456 LEERARERNPGAALLTNERSSASDRAFAEAIREKFALDEDNDQDILDQHVSRVWKDQTPHRSPGT 520
            .||.:.:......:|.:|.||||              .||:...  |...|..:...:.|..|..
Zfish   756 YEEMSFQDEQEVNMLPHELSSAS--------------SEDHSSS--DDSTSVSYSSGSDHIPPPP 804

  Fly   521 MSPCPPIPSRRRTATHDSGMVSDGAMSLSGHSMKHSKSMPDHSSCSRKLTNKWPSMNTDSGIS-- 583
            .||.||.|..:.|.       |...:.::          |:|      |....|:......|:  
Zfish   805 QSPPPPPPPLQFTD-------SPSPLPIT----------PEH------LPQPPPAFQHHPIIAPP 846

  Fly   584 -----MFSADTVTKYKDASSRSGSSTASKLEEAKRRLEDEPRRSRRYAQPPMQHLSQ--QPLASF 641
                 .|.|:..:.:|...:|          |..|.....||||.  .||..|.:.|  ||.|..
Zfish   847 PPPPRPFLANRPSLHKVLPTR----------EELRAQHSHPRRSS--PQPSSQPILQLHQPKAHP 899

  Fly   642 SSSSSGGSISLPHQPPPLPAKPPETIVVFSFCEEP-----VPYRIKIPGTQPTLRQFKDY--LPR 699
            ...||      ||..|    :||.|....:..:.|     ...:..:|.|.|:|.:.|..  .|.
Zfish   900 ILQSS------PHTSP----QPPHTSAQHTRLQHPSQSIYQSQQTTVPRTSPSLTKQKSLHSQPS 954

  Fly   700 RGHFRFFFKTHCEDPDSP 717
            :..|.....:....|..|
Zfish   955 QQSFEGTLSSKVPPPPPP 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:295367
Axin_b-cat_bind 494..543 CDD:285982 12/48 (25%)
DIX 665..739 CDD:279160 11/60 (18%)
grid2ipbXP_009304908.1 PDZ_signaling 9..69 CDD:238492
PDZ_signaling 80..156 CDD:238492
HN_L-delphilin-R1_like 183..262 CDD:259820
PDZ_signaling 335..410 CDD:238492
HN_L-delphilin-R2_like 451..530 CDD:259821
FH2 995..1360 CDD:280362
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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