DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axn and Rgs12

DIOPT Version :10

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_006251413.1 Gene:Rgs12 / 54292 RGDID:3564 Length:1457 Species:Rattus norvegicus


Alignment Length:731 Identity:157/731 - (21%)
Similarity:252/731 - (34%) Gaps:180/731 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NWARTLNHLLEDRDGVELFKKYVEEEAPAYNDHLNFYFACEGLKQ--QTDPEKIKQIIGAIY-RF 111
            :||.:...||:|..||..|..::.:|..  .:::.|:.|||....  ..|.:::......|: :|
  Rat   711 SWAVSFERLLQDPVGVRYFSDFLRKEFS--EENILFWQACECFSHVPAHDKKELSYRAREIFSKF 773

  Fly   112 L-RKSQLSISDDLRAQIKAIKTNPEIPLSPH--IFDPMQRHVEVTIRDNIYPTFLCSEMY----I 169
            | .|:...::.|.:||:.     .:|..:||  :|...|..:...::.:.|..||.|::|    :
  Rat   774 LCSKATTPVNIDSQAQLA-----DDILNAPHPDMFKEQQLQIFNLMKFDSYTRFLKSQLYQECVL 833

  Fly   170 LYIQQMSAQQERCTSSGATGSGSAGSSGSGGSSLAGACALPPTTASGK------------QQLPQ 222
            ..::..:....:...|......|..|..|..|:        |...|||            ::..:
  Rat   834 AEVEGRTLPDSQQVPSSPASKHSISSDHSNVST--------PKKLSGKSKSGRSLNEDVGEEDSE 890

  Fly   223 LVPPGAFINLPVSSVSG-----------------PPAGTC--SASGSVYGPSTSASSSGSISATD 268
            ....|||.:...|..:|                 ...|.|  .:.|||       ||:||:..::
  Rat   891 KKRKGAFFSWSRSRSTGRSQKKKDHGDHAHDALHANGGLCRRESQGSV-------SSAGSLDLSE 948

  Fly   269 TLPRSSTLPTLHEDSVLSLC-----DDFEKVQMQEGGGSLGS---------GSVGA-------GA 312
            ....|:    |..|.....|     |....|...:.|.|:..         |..||       |.
  Rat   949 ACRTSA----LERDKAAKHCCVHLPDGTSCVVAVKSGFSIKEILSGLCERHGINGAAVDLFLVGG 1009

  Fly   313 RAP-----DYPIRLTRDLLIATQKR---RLEIRPPG-AHGYVYNPSTTNTS----YVPNSRVDSE 364
            ..|     |..|..||||.:  :||   ||::.|.. :.|....|:...|.    .|....:|..
  Rat  1010 DKPLVLHQDSSILATRDLRL--EKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVAKYGLDLG 1072

  Fly   365 RASVSSGGRTDSDTMSISSCSMDGRPYI------QRRHSSTESK---AIRQSAMANKETNTFQVI 420
            ...|...|..:...:.....|:||:..|      .|...|||.:   .::||:..|..       
  Rat  1073 SLLVRLSGEKEPLDLGAPISSLDGQRVILEERDPSRGKVSTEKQKGAPVKQSSAVNSS------- 1130

  Fly   421 PRTQRLHS--NEHRPLKEEELVSLLIPKLEEVKRKRDLEERARERNPGAALLTNERSSASDRAFA 483
            ||.   ||  .|.|.|.:...:.:   :.|..|..||  .|..:|....|.:..::....:...|
  Rat  1131 PRN---HSAMGEERTLGKSNSIKI---RGENGKSARD--PRLSKREESIAKIGKKKYQKINLDEA 1187

  Fly   484 EAIREKFALDEDNDQDILDQH--------VSRVWKDQTPHRSPGTMSPCPPIP--SRRRTATHDS 538
            |...|..:..:.|..|  ||.        |...:....|..|...:|..||:.  |:|...:|. 
  Rat  1188 EEFFELISKAQSNRAD--DQRGLLRKEDLVLPEFLRLPPGSSELALSSPPPVKGFSKRAVTSHG- 1249

  Fly   539 GMVSDGAMSLSGHSMKHSKSMP--DHSSCSRKLTNKWPSMNTDSGISMFSADTVTKYKDASSRSG 601
               .:||:...........:.|  ..|.||        :.:..|..|..||.:...........|
  Rat  1250 ---QEGAVQTEESYSDSPATSPASAQSPCS--------AYSPGSAHSPGSAHSPGSAHSTPGPPG 1303

  Fly   602 S----------STASKLEE----AKRRLEDEPRRSRRYAQPPMQHLSQQPLASFSSSSSGGSISL 652
            :          |..|.::|    |.|||..|....      .:|.:.::.:|..:.... |.||.
  Rat  1304 TAQPGEKPTKPSCISTVQEGTTQAWRRLSPELEAG------GIQTVEEEQVADLTLMGE-GDISS 1361

  Fly   653 PHQ----PPPLPAKPP 664
            |:.    |||||...|
  Rat  1362 PNSTLLPPPPLPQDTP 1377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:470619 29/124 (23%)
Axin_b-cat_bind 495..530 CDD:462616 10/44 (23%)
DIX 665..741 CDD:459936 157/731 (21%)
Rgs12XP_006251413.1 PDZ_RGS12-like 20..95 CDD:467194
PTB_RGS12 227..358 CDD:269984
RGS_RGS12 716..830 CDD:188696 29/120 (24%)
RGS12_us1 836..953 CDD:465199 23/131 (18%)
RBD1_RGS12 962..1031 CDD:340656 16/70 (23%)
Ubl1_cv_Nsp3_N-like 1032..1104 CDD:475130 15/71 (21%)
RGS12_us2 1106..1180 CDD:435461 21/88 (24%)
GoLoco 1188..1209 CDD:214645 6/22 (27%)
RGS12_usC 1238..1387 CDD:465198 34/159 (21%)
Blue background indicates that the domain is not in the aligned region.

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