DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axn and loco

DIOPT Version :10

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_732773.1 Gene:loco / 42672 FlyBaseID:FBgn0020278 Length:1541 Species:Drosophila melanogaster


Alignment Length:808 Identity:146/808 - (18%)
Similarity:278/808 - (34%) Gaps:217/808 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PVPGEESRVKKMTEGVADTSKNSSPSYLNWARTLNHLLEDRDGVELFKKYVEEEAPAYNDHLNFY 86
            |.|..........||.|  ..:..||  :||.:...:|:|..|::.|.:::::|..|.|  :.|:
  Fly   799 PAPPSAITASVAAEGAA--QDHGCPS--SWAGSFERMLQDAAGMQTFSEFLKKEFSAEN--IYFW 857

  Fly    87 FACEGLK-QQTDPEKIKQIIGAIYRFLRKSQLSISD--DLRAQIKAIKTNPEIPLSPHIFDPMQR 148
            .|||..: .:::.:::.|......:.|..:.   ||  ::.:|.:::........:|.||.|.|:
  Fly   858 TACERYRLLESEADRVAQAREIFAKHLANNS---SDPVNVDSQARSLTEEKLADAAPDIFAPAQK 919

  Fly   149 HVEVTIRDNIYPTFLCSEMYILYIQQMSAQQ----------ERCTSSGATGSGS-AGSSGSGGSS 202
            .:...::.:.|..|:.|::|...::.....|          |...::...|:.| ...|.|....
  Fly   920 QIFSLMKFDSYQRFIRSDLYKSCVEAEQKNQPLPYSGLDLDELLKTNFHLGAFSKLKKSASNAED 984

  Fly   203 LAGACALP-----------PTTASGKQQLPQLVPPGAFINLPVSSVSGPPAGTCSASGSVYGPST 256
            ......||           .|......|...:..|....|.|::|.|.......::...::...:
  Fly   985 RRRKSLLPWHRKTRSKSRDRTEIMADMQHALMPAPPVPQNAPLTSASLKLVCGQNSLSDLHSSRS 1049

  Fly   257 SASSSGSISATDTLPRSSTLPTLHEDSVLSLCDDFEKVQMQEGGGSLGSGSVGAGARAPDYPIRL 321
            |.||..:.:||.....|:       :||.|||    :|.:.:|..::      ...|..:....|
  Fly  1050 SLSSFDAGTATGGQGAST-------ESVYSLC----RVILTDGATTI------VQTRPGETVGEL 1097

  Fly   322 TRDLLIATQKRRLEIRPPGAHGYVYNPSTTNTSYVPNSRVDSERASVSSGGR------------- 373
            ...||   :||.| :.|  .:..|:..||.:        :|.::.|....|:             
  Fly  1098 VERLL---EKRNL-VYP--YYDIVFQGSTKS--------IDVQQPSQILAGKEVVIERRVAFKLD 1148

  Fly   374 -TDSDTMSISSCSMDG-----RPYIQRRHSSTESKAI------------RQSAMANKE------- 413
             .|...:|:.|.....     ||.:.:.:...|...:            :...||:.:       
  Fly  1149 LPDPKVISVKSKPKKQLHEVIRPILSKYNYKMEQVQVIMRDTQVPIDLNQPVTMADGQRLRIVMV 1213

  Fly   414 TNTFQV-----IPRTQRLHSNEHRPLKE---EELVSLLIPKLEEVKRKRDLEERARERNPGAALL 470
            .:.|||     :|..|   |...:||.:   :||.:.:..:|...|......|::|..:. .::.
  Fly  1214 NSDFQVGGGSSMPPKQ---SKPMKPLPQGHLDELTNKVFNELLASKADAAASEKSRPVDL-CSMK 1274

  Fly   471 TNERSSASDRAFAEAIREKFALDEDNDQDILDQHVSRVWKDQTPHRSPGTMSPCPPIPSRRRTAT 535
            :||..|.:...|....|::                          |..|.: |...:|..::.:|
  Fly  1275 SNEAPSETSSLFERMRRQQ--------------------------RDGGNI-PASKLPKLKKKST 1312

  Fly   536 HDSGMVSDGAMS--------------LSGHSMKHSKSMPDH----------SSCSRKLTNKWPSM 576
            ..|....:.|.:              .:|..::.::.:.:|          :..:|....:...:
  Fly  1313 SSSQQSEEAATTQAVADPKKPIIAKLKAGVKLQVTERVAEHQDELLEGLKRAQLARLEDQRGTEI 1377

  Fly   577 NTDSGISMFSADTVTKYKDASSRSGSSTASKLEEAKRRL--------------EDEPRRSRRYAQ 627
            |       |......|.|:    :.|:..|||.:.:..|              :..||.|...:|
  Fly  1378 N-------FDLPDFLKNKE----NLSAAVSKLRKVRASLSPVSKVPATPTEIPQPAPRLSITRSQ 1431

  Fly   628 PPM--QHLSQQPLASFSSSSSGGSISLPHQPPPLPAKPPETIVVFSFCEEPVPYRIKIPG-TQPT 689
            .|:  ..:.|:|.....:::. ........|||||.||           :.:|.:....| .|||
  Fly  1432 QPVSPMKVDQEPETDLPAATQ-DQTEFAKAPPPLPPKP-----------KVLPIKPSNWGVAQPT 1484

  Fly   690 LRQFKDYLPRRGHFRFFFKTHCEDPDSP 717
            ......|.|.:           :.|.||
  Fly  1485 GNYCNKYSPSK-----------QVPTSP 1501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:470619 25/117 (21%)
Axin_b-cat_bind 495..530 CDD:462616 4/34 (12%)
DIX 665..741 CDD:459936 10/54 (19%)
locoNP_732773.1 PDZ_RGS12-like 70..145 CDD:467194
PTB_RGS12 251..391 CDD:269984
RGS_R12-like 828..941 CDD:188661 25/117 (21%)
RBD1_RGS12_like 1072..1141 CDD:340515 19/92 (21%)
RBD2_RGS12_like 1142..1212 CDD:340587 8/69 (12%)
GoLoco 1354..1375 CDD:214645 1/20 (5%)
Blue background indicates that the domain is not in the aligned region.

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