DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and rgs12b

DIOPT Version :10

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_999889.1 Gene:rgs12b / 378970 ZFINID:ZDB-GENE-031006-13 Length:1540 Species:Danio rerio


Alignment Length:869 Identity:168/869 - (19%)
Similarity:269/869 - (30%) Gaps:305/869 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ADTSKNSSPS--------------YLNWARTLNHLLEDRDGVELFKKYVEEEAPAYNDHLNFYFA 88
            :|.|.||:.|              ..:||.....||:|..||..|.:::::|..  .:::.|:.|
Zfish   710 SDNSLNSNASLPSVQCHRRHTERRVASWAVCFERLLQDPVGVRYFSEFLKKEFS--EENILFWQA 772

  Fly    89 CEGLKQ--QTDPEKIKQIIGAIYR-FL-RKSQLSISDDLRAQI-KAIKTNPEIPLSPHIFDPMQR 148
            ||....  :||.:::.|....||. || .|:...::.|.:||: ..|...|.    |.:|...|.
Zfish   773 CEYFSHVPETDKKQLSQRAREIYNSFLSSKATTPVNIDSQAQLADDILNAPR----PDMFKEQQL 833

  Fly   149 HVEVTIRDNIYPTFLCSEMYILYIQQMSAQQE------------RCTSSGATGS----------- 190
            .:...::.:.|..||.|   .||.:.|.|:.|            ..||..:|||           
Zfish   834 QIFNLMKFDSYTRFLKS---YLYQECMLAEVEGRPLPDPYQVPSSPTSKHSTGSDRSNLSTPKKV 895

  Fly   191 ----------------------------------------------------GSAGSSGSGGSSL 203
                                                                ||.|...|.||..
Zfish   896 QDDKKSKSGRSLNEDSRDEHGDKKKSIFFSWSRNRSFGKGSKKRDLADYSFTGSNGRRESQGSLS 960

  Fly   204 AGACALPPTTASGKQQ---------LPQLVPPGAFINLPVSSVSGPP-----------AGTCSAS 248
            :||.....|:.|||.:         |.:.......||||..|....|           .|.|...
Zfish   961 SGASLELATSGSGKNEGEVSRNSMSLSERAVRHCNINLPDGSCCSVPIRPGVSIREVLLGLCEKL 1025

  Fly   249 GSVYGPSTSASSSGSISATDTLPRSSTLPTLHEDSVLSLCD-------------DFEKVQMQEGG 300
            |.            :::|.|........|.:.:...::||.             |...:      
Zfish  1026 GI------------NLAAVDLFLVGGEKPLVLDQDCMTLCSRDLRLEKRTLFRLDLVPI------ 1072

  Fly   301 GSLGSGSVGAGARAPDYPIR-----------LTRDLLIAT---QKRRLEIRPPGAHGYVYNPSTT 351
                :.|||..|: |..|:.           |....|:||   :|..|::.              
Zfish  1073 ----NRSVGLKAK-PTKPVTEVLRPVVAKYGLNLGDLVATISGEKEPLDLG-------------- 1118

  Fly   352 NTSYVPNSRVDSERASVSSGGR-TDSDTMSISSCSMDGRPYIQRRHSST-------ESKAIRQSA 408
                :|.|.:|..|..:.:|.. :..|...:.|....|.|...|..|:|       ::.|::..|
Zfish  1119 ----LPISNLDGLRVVLEAGDHVSGKDKQKLVSSKSHGPPLSTRSQSATGEDKTAGKASAVKTRA 1179

  Fly   409 MANKETNT----------FQVIPRTQRLHSNEHRPLKEEELVSLLIPKLEEVKRKRD-------- 455
            ...|....          |::|.:.|...:::.|.|..:.  .|::|....:..:.|        
Zfish  1180 QVEKRKQKKLNIDEAEEFFELISKAQSNRADDQRGLLNKS--DLVLPDFLRLDTEADGNNLSSTP 1242

  Fly   456 --LEERARERNPGAALLTNERSSASDRAFAEAIREKFALDEDNDQDILDQHVSRVWKDQTPHRSP 518
              .:.|.|.:..|:||..:.::.:.|.| .|....:.||...|  ..|....||:        .|
Zfish  1243 ISHKTRPRSKENGSALSASHQTQSLDSA-GEGKAPRRALMPPN--SALRNTSSRI--------PP 1296

  Fly   519 GTMSPCPPIPSRRRTAT-----------------HDSGM----VSDGAMSLSGHSMKHSKSMPDH 562
            ...|...|||..:...:                 .:|||    |::|.::....|:.|...:|..
Zfish  1297 PFSSSLSPIPHSQMGGSSGITDWRSDGGVQALEEEESGMDLTFVAEGDITSPNSSLLHQSPIPLP 1361

  Fly   563 SSCSRKLTNKWPSMNTDSGISMFSADTVTKYKDASSRSGSSTASKLEEAKRRLEDEPRRSRRYAQ 627
            .|..|.              .:...||.   :|:.:|||......:...:.|........|    
Zfish  1362 PSPERS--------------HLLKEDTC---QDSWARSGGLMTKTVVSNRNRFSSVKNERR---- 1405

  Fly   628 PPMQHLSQQPLASFSSSSSGGSISLPHQPPPLPAKPPETIVVFSFCEEPVPYRIKIPGTQPTLRQ 692
                   |:...|.|..|...:.|.|..|||.|...|.:          .|.|::..|.:..|  
Zfish  1406 -------QRDRTSVSKYSHRRAPSAPPPPPPHPPPAPPS----------APPRVRGAGKRSPL-- 1451

  Fly   693 FKDYLPRRGHFRFFFKT---HCED 713
                     |.|.....   ||.|
Zfish  1452 ---------HVRGALDVDGIHCGD 1466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:470619 31/119 (26%)
Axin_b-cat_bind 495..530 CDD:462616 9/34 (26%)
DIX 665..741 CDD:459936 9/52 (17%)
rgs12bNP_999889.1 PDZ_RGS12-like 21..96 CDD:467194
PTB_RGS12 239..372 CDD:269984
RGS_RGS12 741..855 CDD:188696 33/122 (27%)
RGS12_us1 861..973 CDD:465199 15/111 (14%)
RBD1_RGS12 992..1061 CDD:340656 14/80 (18%)
RBD2_RGS12 1062..1134 CDD:340658 17/100 (17%)
RGS12_us2 1136..1193 CDD:435461 10/56 (18%)
GoLoco 1195..1216 CDD:214645 4/20 (20%)
RGS12_usC <1323..1374 CDD:465198 10/64 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.