DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and rgs14a

DIOPT Version :9

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_009305919.2 Gene:rgs14a / 327368 ZFINID:ZDB-GENE-030131-5579 Length:554 Species:Danio rerio


Alignment Length:562 Identity:118/562 - (20%)
Similarity:200/562 - (35%) Gaps:148/562 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGHPSGIRKHDDNEC----SGPRPPV--------PGEESRVKK---------MTEGVAD------ 39
            :|....:||.....|    .|.|..:        |.|:...|.         ||:.|:|      
Zfish     8 TGSDRAVRKRLSRRCVCLRGGFRESLSLWAQSCQPDEDMSKKMSSLAVPTGLMTQAVSDGELNLR 72

  Fly    40 ---------TSKNSSPS------------YLNWARTLNHLLEDRDGVELFKKYVEEEAPAYNDHL 83
                     .|::||.|            .::||....|||||..||..|.:::..|..|.|  :
Zfish    73 LSSCGSSSSLSESSSRSGGSQAADGPASRVVSWAVCFEHLLEDHVGVRYFTEFLRSEVSAEN--I 135

  Fly    84 NFYFACEGLKQ--QTDPEKIKQIIGAIY-RFLRKSQL---SISDDLRAQIKAIKTNPEIPLSPHI 142
            .||.|||..|:  .:..|::|:....|| .||.:|.|   :|.|..:.:.:.:    |:| :|.:
Zfish   136 LFYQACEKFKKIPTSRLEEMKKEARLIYDTFLSESSLHAVNIDDTAQTEEREL----EMP-TPDM 195

  Fly   143 FDPMQRHVEVTIRDNIYPTFLCSEMYILYIQQMSAQQERCTSSGATGSGSAGSSGS--GGSSLAG 205
            |:..|..:...::.:.|..|:.|.:|           :.|..: ...|....|.|:  ..|.::.
Zfish   196 FNKAQAQIFKLMKMDSYTRFVRSPLY-----------QNCMLA-CVESRPLPSIGTPEPKSKMSK 248

  Fly   206 ACALPPTT--------------ASGKQQLPQLVPPGAFINLPVSSVSGPPAGTCSASGS----VY 252
            ..|.||:.              .|.|::|......||..:....:||...:.....|.|    |.
Zfish   249 KSATPPSNRKSVELKVPSSDSKTSRKKRLENRGSWGADQSFERMAVSRKESQISVKSNSSLELVS 313

  Fly   253 GPSTSASSSGSISATDTLPRSSTLPTLHEDSVLSLCDDFEKVQMQEGGGSLGSGSVGAG------ 311
            |...:.:...|::.:|....||..||         .|.:..|.:.:|..||.|...|..      
Zfish   314 GSGRAENGRCSVAVSDPEALSSGSPT---------ADKYCCVYLPDGTASLVSARAGLSLRDMIS 369

  Fly   312 ----------------ARAPDYPIRLTRDL-LIATQKRRLEIRPPGAHGYVYNPSTTN------- 352
                            .|..|.|:.|.:|. :...|:..||::...|....:...|..       
Zfish   370 SLCEKRAFPLRDVLLYLRGKDKPLSLDQDCSMFGDQQLSLELKITFALEIAFLGRTIGIIAKSSK 434

  Fly   353 ------TSYVPNSRVDSERASVSSGGRTDSDTMSISSCSMDGRPYIQRRHSSTESKAIRQSAMAN 411
                  :|.:...::..:...:|..|..|:..||.|...:..:. ::...::.|.:....||.||
Zfish   435 SVGEALSSVLEKQQLRPQDVQLSLSGSNDALNMSTSVFRLANKT-VRLDRAALEIQTSSPSARAN 498

  Fly   412 KETNTFQ-------VIPRTQRLHSNEHRPLKEEELVSLLIPK 446
            ......|       ::.|.|...:::.|.|..:|  .|.||:
Zfish   499 SRGRKHQDVDGLVELLNRAQCSRADDQRGLLTKE--QLEIPQ 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:295367 36/120 (30%)
Axin_b-cat_bind 494..543 CDD:285982
DIX 665..739 CDD:279160
rgs14aXP_009305919.2 RGS_R12-like 109..223 CDD:188661 36/131 (27%)
RGS12_RBD 343..415 CDD:176412 14/71 (20%)
TGS 423..483 CDD:330245 8/60 (13%)
GoLoco 508..529 CDD:308026 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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