DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and RSG7

DIOPT Version :9

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster


Alignment Length:543 Identity:107/543 - (19%)
Similarity:181/543 - (33%) Gaps:190/543 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 AQQERCTSSGATGSGSAGSSGSGGSSLAGACALP-PTTASGKQQLPQLVPPGAFINLPVSSVSGP 240
            |.:.:.|::.:|.:.:.....|..||...|.|:| |.:|:.      :|..||         .|.
  Fly     8 ADKTQATNASSTAAPAKTDCTSSNSSDPLAVAIPEPQSATA------VVGGGA---------GGA 57

  Fly   241 PAGTCSASGSVYGPSTSASSSGSISATDTLPRSSTLPTLHEDSVLSLCDDFEKVQMQEGGGSLGS 305
            ..||.:       ||.:..::||.:.|.    ||..|                       .:.|:
  Fly    58 APGTAT-------PSPTPLANGSNNGTG----SSVSP-----------------------AATGT 88

  Fly   306 GSVGAGARAPDYPIRLTRDLLIATQKRRLEIRPPGAHGYVYNPSTTNTSYVPNSRVDSERA---S 367
            |:|...|.||             .........||.:     ||:|.:||..  |.|.::.|   :
  Fly    89 GAVATAASAP-------------AAAGTTSASPPAS-----NPTTASTSTA--SVVGAKTAAATT 133

  Fly   368 VSSGGRTDSDTMSISS---------CSMDGRPYIQRRHSSTESKAIRQSAMANKE--TNTFQVIP 421
            .||...|.|.|.:..|         .::.|..: ...|:..:..|..|||....:  |.|...:|
  Fly   134 TSSSSATSSSTAAAGSKQSGSSGGLLTVSGNHH-HHHHAHPQQSAAGQSAAQPPQPPTATALAVP 197

  Fly   422 RTQRLHSNEHRPLKEEELVSLLIPKLEEVKRKRDLEERARERNPGAALLTNERSSASDRAFAEAI 486
            ..    |:..|..|.|:..::|:     .|:...:.|:.:..:.|.|:.|       .:||...:
  Fly   198 SA----SHHQRGGKNEDAPNILV-----YKKMEAIIEKMQAESTGVAVRT-------VKAFMSKV 246

  Fly   487 REKFA--------LDEDNDQDI------------------LDQHVSRVWKD------QTPHRSPG 519
            ...|.        |...:.:|:                  :|.|...|..|      |||:..| 
  Fly   247 PSVFTGADLVAWILKNFDVEDVTEALHFAHLLSSHGYIFPIDDHALTVKNDGTFYRFQTPYFWP- 310

  Fly   520 TMSPCPPIPSRRRTATHDSGMVSDGAMSLSGHSMKHSKSMPDHSSCSRKLTNKWPSMNTDSGISM 584
              |.|.. |..           :|.|:.|                |.|.:.||     |...::.
  Fly   311 --SNCWE-PEN-----------TDYAVYL----------------CKRTMQNK-----TRLELAD 340

  Fly   585 FSADTVTKYKDASSR----------SGSSTASKLEEAKRRLEDEPRRSRRYAQPPM--------- 630
            :.|:.:.|.:...||          |.|..|.|.::.:|::.|...|:......||         
  Fly   341 YEAENLAKLQKMFSRKWEFIFMQAESQSKVAKKRDKLERKVLDSQERAFWDVHRPMPGCVNTTEI 405

  Fly   631 --QHLSQQPLASFSSSSSGGSIS 651
              :...::..:|..:.|:|.|::
  Fly   406 DIKKAYRRGGSSHGTGSAGASLA 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:295367
Axin_b-cat_bind 494..543 CDD:285982 12/72 (17%)
DIX 665..739 CDD:279160
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897 16/93 (17%)
GGL 432..493 CDD:128520
RGS_R7-like 504..627 CDD:188660
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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