DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and rgs-2

DIOPT Version :10

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001379248.1 Gene:rgs-2 / 181414 WormBaseID:WBGene00004345 Length:181 Species:Caenorhabditis elegans


Alignment Length:163 Identity:45/163 - (27%)
Similarity:79/163 - (48%) Gaps:21/163 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NECSGPRPPVPGEESRVKKMTEGVADTSKNSSPSY---LNWARTLNHLLEDRDGVELFKKYVEEE 75
            |.....:|.|.|..|..||..|      .:..|:|   ..|:::..:|::.|.|.:.|.::::.|
 Worm    18 NSSPSGKPYVSGSVSVEKKNQE------NDGPPTYEIVFGWSQSFENLMKHRAGQKYFAEFLKGE 76

  Fly    76 APAYND-HLNFYFACEGLKQQTDPEKIKQIIGAIYR----FLRKSQLSISDDLRAQIKAIKTNPE 135
               |:| ::.|:.|||.||::.:.|||::....||.    .|...::|:...:|   :.:.||..
 Worm    77 ---YSDENILFWQACEELKREKNAEKIEEKARIIYEDFISILSPKEVSLDSRVR---EIVNTNMG 135

  Fly   136 IPLSPHIFDPMQRHVEVTIRDNIYPTFLCSEMY 168
            .| |...||..|..:...::.:.||.||.|.:|
 Worm   136 RP-SASTFDEAQNQIYTLMQRDSYPRFLASNIY 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:470619 34/119 (29%)
Axin_b-cat_bind 495..530 CDD:462616
DIX 665..741 CDD:459936
rgs-2NP_001379248.1 RGS 52..169 CDD:470619 35/123 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.