DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Axn and rgs14b

DIOPT Version :9

Sequence 1:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_017208541.1 Gene:rgs14b / 100003648 ZFINID:ZDB-GENE-101006-2 Length:573 Species:Danio rerio


Alignment Length:555 Identity:112/555 - (20%)
Similarity:184/555 - (33%) Gaps:181/555 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PPVPGEESRVKKMTEGVADTSKNSSPSYLNWARTLNHLLEDRDGVELFKKYVEEEAPAYNDHLNF 85
            |.||.|.||      ||...:        :||.:...||||..||..|..:::.|..|.|  :.|
Zfish    44 PTVPSEGSR------GVGQVA--------SWAVSFERLLEDPVGVCYFTAFLKSEVSAEN--ILF 92

  Fly    86 YFACEGLKQ----QTDPEKIKQIIGAIYR-FLRK---SQLSISDDLRAQIKAIKTNPEIPLSPH- 141
            :.|||..::    ||  |::|:...:||. ||..   |.::|.|.:|.:.|.::       :|| 
Zfish    93 WSACEKFRKIPGHQT--EQLKREALSIYNTFLSSNATSPINIDDRVRVEEKDVQ-------NPHA 148

  Fly   142 -IFDPMQRHVEVTIRDNIYPTFLCSEMYILYIQQMSAQQERCTSSGATGSGSAGSSGSGGSSLAG 205
             ||...|:.:...::.:.|..|:.|::|           :.|..:...|                
Zfish   149 DIFQKAQQQIFKLMKFDSYTRFVRSQLY-----------QSCMLANVEG---------------- 186

  Fly   206 ACALPPTTASGKQQLPQLVPPGAFINLPVSSVSGPP--------------AGTCSASG------- 249
                        :.||.|...|..:.|...:.|..|              |...:|..       
Zfish   187 ------------RPLPLLDSRGKPLALSKQTNSNSPREQAKFDRTKERLKAKPSAADAEDVVERR 239

  Fly   250 -----SVYGPSTSASSSGS-----ISATDTLPRSSTLPTLHEDSVLSLCDDFEKVQMQEGGGSLG 304
                 .:.|........||     ||....|.:||.:..|...|.....|.:..|.:.:|..||.
Zfish   240 KVNLQGMMGKDKRKEKRGSWGESPISFKTGLVKSSEVEKLVSRSADGKVDKYCCVFLPDGTASLT 304

  Fly   305 SGSVGAGAR-----------------------APDYPIRLTRD-LLIATQKRRLEIRPPGAHGYV 345
            ....|...|                       ....|:.|.:| .::..|:..||:|...|....
Zfish   305 PARPGLTVRNMLTGLCEKRRLPLSDIIIYLQGKDKQPLSLDQDSSVLQDQQVTLELRVTFAVKVA 369

  Fly   346 YNPSTTNTSYVPNS-------------RVDSERASVS---SGGRTDSDT---------------- 378
            :...|.......|.             |:.|..|:|:   ||.:...:|                
Zfish   370 FTGKTVAVVVKSNKTLQEALAAMLNKYRLRSHEATVTMRDSGQKISLNTPVTFLANKALILDKGV 434

  Fly   379 -MSISSCSMDGRPYIQRRHSSTESKA---------IRQSAMANKET----NTFQVIPRTQRLHSN 429
             .:.||......|..|.|..:.::..         :||.....:.|    ...:::.|.|...::
Zfish   435 DEASSSKGNFSPPSFQDRRGAVDANMFSPGMSRPNVRQRNPGLRRTYDMEGLVELLNRAQCCSAD 499

  Fly   430 EHRP-LKEEEL-----VSLLIPKLEEVKRKRDLEE 458
            :.|. ||:|.|     :.|.:.::||.:..|.||:
Zfish   500 DQRGLLKKEHLMLPQFLQLPLDEVEEAETCRSLED 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AxnNP_733336.1 RGS 55..170 CDD:295367 36/124 (29%)
Axin_b-cat_bind 494..543 CDD:285982
DIX 665..739 CDD:279160
rgs14bXP_017208541.1 RGS_R12-like 64..178 CDD:188661 36/135 (27%)
UBQ 291..364 CDD:320785 13/72 (18%)
TGS 365..432 CDD:330245 10/66 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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