DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS28a and RpS28b

DIOPT Version :10

Sequence 1:NP_651764.1 Gene:RpS28a / 43564 FlyBaseID:FBgn0039739 Length:64 Species:Drosophila melanogaster
Sequence 2:NP_572568.1 Gene:RpS28b / 31897 FlyBaseID:FBgn0030136 Length:65 Species:Drosophila melanogaster


Alignment Length:65 Identity:53/65 - (81%)
Similarity:62/65 - (95%) Gaps:1/65 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKP-QYARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRLR 64
            |||| .:|||:::|||||||||||||:|||||:|:||||||||||||.||||:|||:||||||||
  Fly     1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65

  Fly    65  64
              Fly    66  65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS28aNP_651764.1 S1_S28E 5..64 CDD:239904 47/58 (81%)
RpS28bNP_572568.1 S1_S28E 8..65 CDD:239904 47/56 (84%)

Return to query results.
Submit another query.