DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS28a and rps2802

DIOPT Version :10

Sequence 1:NP_651764.1 Gene:RpS28a / 43564 FlyBaseID:FBgn0039739 Length:64 Species:Drosophila melanogaster
Sequence 2:NP_588343.1 Gene:rps2802 / 2539085 PomBaseID:SPCC285.15C Length:68 Species:Schizosaccharomyces pombe


Alignment Length:58 Identity:43/58 - (74%)
Similarity:50/58 - (86%) Gaps:0/58 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRLR 64
            |:|:::||||||:|..|||||||:.|.||.||||||||||..|||.|||:||||||||
pombe    11 AKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVREDDILVLLESEREARRLR 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS28aNP_651764.1 S1_S28E 5..64 CDD:239904 41/56 (73%)
rps2802NP_588343.1 S1_S28E 9..68 CDD:239904 41/56 (73%)

Return to query results.
Submit another query.