DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS28a and rps-28

DIOPT Version :10

Sequence 1:NP_651764.1 Gene:RpS28a / 43564 FlyBaseID:FBgn0039739 Length:64 Species:Drosophila melanogaster
Sequence 2:NP_001370541.1 Gene:rps-28 / 176975 WormBaseID:WBGene00004497 Length:65 Species:Caenorhabditis elegans


Alignment Length:65 Identity:50/65 - (76%)
Similarity:57/65 - (87%) Gaps:1/65 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKPQYARVVEILGRTGSQGQCTQVRVEFLGDQ-SRQIIRNVKGPVRVGDILSLLETEREARRLR 64
            |||...|||.:::||||||||||||||||:.|| :|.||||||||||.||||:|||:||||||||
 Worm     1 MDKLTLARVTKVIGRTGSQGQCTQVRVEFINDQNNRSIIRNVKGPVREGDILTLLESEREARRLR 65

  Fly    65  64
             Worm    66  65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS28aNP_651764.1 S1_S28E 5..64 CDD:239904 45/59 (76%)
rps-28NP_001370541.1 S1_S28E 5..65 CDD:239904 45/59 (76%)

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