DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nlp and Npm3

DIOPT Version :9

Sequence 1:NP_001263094.1 Gene:Nlp / 43560 FlyBaseID:FBgn0016685 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_032749.1 Gene:Npm3 / 18150 MGIID:894653 Length:175 Species:Mus musculus


Alignment Length:128 Identity:38/128 - (29%)
Similarity:64/128 - (50%) Gaps:13/128 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FYGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNVVEV---NTPKDSVQIPIAVL 67
            |:|..|:..:.|.|:.|:|:......|.:..:.| .|...:|.|||||   :.....:.:|:|.|
Mouse    38 FFGCELSGHTRSFTFKVEEEDDTEHVLALNMLCL-TEGATDECNVVEVVARDHDNQEIAVPVANL 101

  Fly    68 KAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNIKDDVEVV----DMEEDDEEDDVAEDE 126
            :......::.|....:..|||:|..|||||.|.|.:     ::|    |:.|::.:|:..|||
Mouse   102 RLSCQPMLSVDDFQLQPPVTFRLKSGSGPVRITGRH-----QIVCINNDLSEEESDDESEEDE 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NlpNP_001263094.1 Nucleoplasmin 6..104 CDD:397268 31/100 (31%)
Npm3NP_032749.1 Nucleoplasmin 35..>141 CDD:281111 31/108 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848746
Domainoid 1 1.000 44 1.000 Domainoid score I12219
eggNOG 1 0.900 - - E1_2C49J
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I5420
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1485080at2759
OrthoFinder 1 1.000 - - FOG0000973
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22747
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11310
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.930

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