DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nph and LOC4577442

DIOPT Version :10

Sequence 1:NP_651760.1 Gene:Nph / 43559 FlyBaseID:FBgn0039735 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_001237521.2 Gene:LOC4577442 / 4577442 VectorBaseID:AGAMI1_012983 Length:175 Species:Anopheles gambiae


Alignment Length:160 Identity:73/160 - (45%)
Similarity:90/160 - (56%) Gaps:17/160 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAET-NINDD 64
            |..|.|||.||.|......::..:.||.| ..::||:|||..||.||...||||||.|| .|.| 
Mosquito     1 MTDEYFYGATLKEGSKTVTWDPDNKPEGY-PRTNKLVIKQCLLGHEAAADEFNVVQVETMTIRD- 63

  Fly    65 GEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPVHVCGKVEMNFGEFDDGQIYEEY 129
                ||:||||||||||.|..|.::||.:..|||.||:|.||||:.|...:       |.:.||:
Mosquito    64 ----TLRIPIAVLKVGELRQCRMDLEFSDAPVTFTLVEGKGPVHIHGLHLL-------GSLVEEF 117

  Fly   130 SDEEEDSELEFDEEAAPQ---TNGKSNKKK 156
            .|.||..|...|||.|.:   .:|.|.|||
Mosquito   118 EDMEEMEEEVLDEEEADEDEDEDGASQKKK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NphNP_651760.1 Nucleoplasmin 6..112 CDD:460792 54/106 (51%)
LOC4577442XP_001237521.2 Nucleoplasmin 6..109 CDD:460792 55/108 (51%)

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