DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11504 and CG9948

DIOPT Version :10

Sequence 1:NP_651758.1 Gene:CG11504 / 43557 FlyBaseID:FBgn0039733 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_648063.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster


Alignment Length:171 Identity:32/171 - (18%)
Similarity:68/171 - (39%) Gaps:35/171 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RRGLWDMTCDEYRKKDVKQRLLNEVSQVLGGNIPINELEKKFHTLRTQYHREISRMKRKEPYNSK 82
            |.||     ..|.....|..:...:::::|.::....:  :::.|..|:.:|   .:|.:...|.
  Fly    28 RSGL-----SNYDAMKAKTDIWARIAEMMGCDVDFCLM--RWNNLHYQFRKE---FRRADTSGST 82

  Fly    83 WFGFKNLVFLSSPYACRSTKGRLKADLQGDERKFVLGEVTADHNSDSSTPANHNSNT--NANMNE 145
            |...:.|.||:........|.:.|.:.|         |.|.    .:.||.....:|  :.::.:
  Fly    83 WPYLERLRFLAEIQPPSKVKTKPKTNKQ---------EATI----QTETPVQFLWDTFEDGDVPQ 134

  Fly   146 EYLRKNHASSRAQELEKLIEETTKDV--DDIDESELEEGEV 184
            :        |....:|::|||.::.:  ::|...|.|..|:
  Fly   135 Q--------SSTFIIEEVIEEPSEQIIQEEIIYEEQEPAEI 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11504NP_651758.1 MADF_DNA_bdg 11..92 CDD:463144 13/73 (18%)
CG9948NP_648063.1 MADF 14..95 CDD:214738 15/76 (20%)

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