DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11504 and madf-4

DIOPT Version :9

Sequence 1:NP_651758.1 Gene:CG11504 / 43557 FlyBaseID:FBgn0039733 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:421 Identity:69/421 - (16%)
Similarity:133/421 - (31%) Gaps:141/421 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TLQLISEYRSRRGLWDMTCDEYRKKDVKQRLLNEVSQVLGGNIPINELEKKFHTLRTQYHREISR 72
            ||.||...:....:::.....::..|.|..:...:|..:|.:....|||:|:..:|.:|.|...:
 Worm    19 TLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRLRKQ 83

  Fly    73 MKRKEPY--NSKWFGFKNLVFLSSPYACRSTKGRLK-------ADLQGDERKFVLGEVTADHNSD 128
            .|:|.|.  .:||:.:.:.:....||.....:.|.|       .|...|:..|:.|...    .:
 Worm    84 DKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQKDYLNSNTPDFLDDDTAFLDGLSV----KE 144

  Fly   129 SSTPANHNSNTNANMNEEYLRKNHASSRAQELEKLIEETTKDVDDIDESELEEGEVKPKQAKEMS 193
            ...|.:..::.:|..|..:...:.:||.:....:.::..|.|::|              ..|.::
 Worm   145 MLKPESLLTSNDAGYNSPHTTSSSSSSGSNNNGRFLDSPTIDIED--------------DKKNLA 195

  Fly   194 V---RFVSLNEQEETEPLENHHQTLMDLHHQGNAVEAVSFQANESGELHYQTTPTQSTGSSSVHV 255
            :   :||:    .:||..:||.                 |......:|.:.||            
 Worm   196 LIYDKFVA----NQTENEKNHR-----------------FSNKHGKDLLFSTT------------ 227

  Fly   256 MPTRIIKIQRRDTSSGQEDSYFEEHTQLHPPPVKRMYYEASPASHNTTSILSPALESSANGTASS 320
                                                                       |.....
 Worm   228 -----------------------------------------------------------NTLIEK 233

  Fly   321 VLTTSPGITMSNLRLPKVNTPPKPAQAQAIPSPPPP----TIVSL------PPARDEFATYGEYV 375
            :.|||...:.|..|        ||...|.:||.|||    |.:.|      .|..|:.:.:...:
 Worm   234 LATTSTAPSSSRKR--------KPIPVQILPSSPPPQEKNTKIELLEDILNEPNEDQVSLFVRSI 290

  Fly   376 ANEMRAISNREVLVALKHRINTAIFEASMAE 406
            |..:..: :||.....:..|:..:::....:
 Worm   291 ARTLNDL-DREKFAMARVEISKVLYKIEFGD 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11504NP_651758.1 MADF_DNA_bdg 11..92 CDD:287510 18/82 (22%)
CytochromB561_N 238..>409 CDD:286826 25/179 (14%)
madf-4NP_505565.3 MADF 22..111 CDD:214738 20/88 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12243
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.