DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sas-6 and sass6l

DIOPT Version :10

Sequence 1:NP_651756.1 Gene:Sas-6 / 43555 FlyBaseID:FBgn0039731 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_001039141.1 Gene:sass6l / 733966 XenbaseID:XB-GENE-5783525 Length:661 Species:Xenopus tropicalis


Alignment Length:481 Identity:117/481 - (24%)
Similarity:206/481 - (42%) Gaps:83/481 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NGEMTRSSKRSCLLYAERVDFKELLQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFI 98
            |..:|..|:.|    :..|..|||: :||::.:|...:|..|:....||.||..|.|.|.||.|.
 Frog    25 NVRLTVESRSS----SNPVHKKELI-VRLSDDTDPFFLYNLTLGEEDFQSLKNQQGLLVEFSAFP 84

  Fly    99 DNVVRMLKDCQSGKLELHLTTRDQNLSSGREVHDYYLQFV----------------EIRSFKNLV 147
            ...:.:|:.|              .|...:.|..:.||.|                |...||:|:
 Frog    85 QRFIDLLEQC--------------ILEQDKPVPRFLLQLVTSLNALDCMPASLNIIETNPFKHLI 135

  Fly   148 HLSLPCRSAPLNTVLFYINSMLEASHKKQYILEQSMQQMQAEIN-----AQRAHAERLTTENTNI 207
            ||||...:...:.|..|:.:.::....:...|::.:|:.:.|::     .|:|.|:: ..|...:
 Frog   136 HLSLKLLAG
SDSDVKKYLATCIKNLKLENCTLKEKLQKSEEELSKRLGVTQQALADK-CKELDKL 199

  Fly   208 REALAENTRILEEKHAAEVHQYQEKLSKIN-------EQRSNELE-RNRRAISGFQAQLDKASLE 264
            |...|..|.:|..||..|:...:||..::.       ||:..||| .:.|.|...::::.:....
 Frog   200 RNEWASQTSLLTSKHTQEISAEREKALQVQSQYQLQYEQQKKELETTSSRTIQHLESRVSELEAV 264

  Fly   265 KAELKSAQEQAEK-------RCQTLSEELSCCKARVCTLKEQNDKLHGDVANIRKHERKLEYKIE 322
            ..:|...:.::|.       :...:.||....|..|.:|:.:|..|..:.     ||:  |..|.
 Frog   265 NKDLTERKYKSESCIRELKGKLSGMEEEYHRTKQEVTSLRRENATLDSEC-----HEK--EKLIN 322

  Fly   323 DLKQHTVELQEHIQKGNKEKANIAAELEAEKKILHTKR----------------QALEMASEEIS 371
            .||..|..|::.::  :||:..|.:....|....|.|:                ..::..|||:.
 Frog   323 QLKTRTAVLEQEVK--DKEQVIIRSVDACESAQEHKKKLEDSLDQKQVQTGKLETTVKSLSEELI 385

  Fly   372 KANQIIVKQSQELLNLKKTIAWRTEVALQQEKAVQAKESLLSLRENELREARITIEKLREEIPQQ 436
            |||:||.|...::..|.:.|..:..|.:||||.:..||..|...:.||...:.|::...||:.:.
 Frog   386 KANEIIKKLQTDMKKLMEKIKLKNAVTMQQEKLLGEKEQTLQKEKLELTNIKHTLKMKEEEMLKL 450

  Fly   437 LQSMRNFAQGLEQKYSKQILILKERL 462
            .:.:.:..:.||:  |||:|...|.:
 Frog   451 KEQLDSTTEKLEE--SKQLLKTNENV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sas-6NP_651756.1 HD_SAS6_N 23..156 CDD:408998 38/137 (28%)
Smc <169..>463 CDD:440809 77/330 (23%)
sass6lNP_001039141.1 HD_SAS6_N 5..144 CDD:408998 38/137 (28%)
SMC_prok_B <161..469 CDD:274008 75/319 (24%)
CwlO1 351..>594 CDD:443091 33/126 (26%)

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