DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sas-6 and Sass6

DIOPT Version :10

Sequence 1:NP_651756.1 Gene:Sas-6 / 43555 FlyBaseID:FBgn0039731 Length:472 Species:Drosophila melanogaster
Sequence 2:XP_063138007.1 Gene:Sass6 / 310807 RGDID:1306255 Length:657 Species:Rattus norvegicus


Alignment Length:451 Identity:119/451 - (26%)
Similarity:202/451 - (44%) Gaps:55/451 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDNVVRMLKDC------QSGKLELH 116
            |.:|||:.:|...:|...:....||.||..|.|.|.|..|....:.:|:.|      ::.:..|.
  Rat    44 LVIRLTDDTDPFFLYNLVISEEDFQSLKLQQGLLVDFLSFPQKFIDLLQQCMQEHVKETPRFLLQ 108

  Fly   117 LTTRDQNLSSGREVHDYYLQFVEIRSFKNLVHLSLPCRSAPLNTVLF--YINSMLEASHKKQYIL 179
            ||:....|.:.    ..:|..||...||:|:||||  :..|.|.|..  ::...|:.|.:::..|
  Rat   109 LTSSAALLDNS----PVFLNVVETNPFKHLIHLSL--KLLPGNDVEIKKFLAGCLKCSKEEKLSL 167

  Fly   180 EQSMQQMQAEINAQRAHAERLTTENTNIREALAENTRILEEKHAAEVH-----------QYQEKL 233
            .:|:..:..:::..:........|...:|...|.:|..|..||:.|:.           |||:: 
  Rat   168 TKSLDDVTRQLHITQETLSEKMQELDKLRSEWASHTAALTNKHSQELTNEKEKALQTQVQYQQQ- 231

  Fly   234 SKINEQRSNELE----RNRRAISGFQAQLDKASLEKAELK----SAQEQAEKRCQTLSEELSCCK 290
               :||:..:||    ||...:....::|:.|:.|..|.|    |...:.:.:...:.|||...|
  Rat   232 ---HEQQKKDLEALHQRNIHQLQNRLSELEAANKELTERKYKGDSTVRELKAKLAGVEEELQRTK 293

  Fly   291 ARVCTLKEQNDKLHGDVANIRKHERKLEYKIEDLKQ----------HTVELQEHIQKGNKEKANI 345
            ..|.:|:.:|..|..:.....||..:|:.|:..|:|          .|.|..:.||    |:..:
  Rat   294 QEVLSLRRENCTLDTECHEKEKHINQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQ----EQKQV 354

  Fly   346 AAELEAEK-KILHTKRQA-LEMASEEISKANQIIVKQSQELLNLKKTIAWRTEVALQQEKAVQAK 408
            |.|...|| :|...|.:| ::..|.|:.|||:||.|...:|..|...:..:..|.:||||.:..|
  Rat   355 ALEENGEKNQIQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEK 419

  Fly   409 ESLLSLRENELREARITIEKLREEIPQQLQSMRNFAQGLEQKYSKQILILKERLAIPTGKE 469
            |.:|.....|.::|..::....:|:.:..:.:....|.||:  |||:|...|:|.....||
  Rat   420 EEMLQKERKESQDAGQSLRAKEQEVCRLQEQLETTVQKLEE--SKQLLKNNEKLITWLNKE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sas-6NP_651756.1 HD_SAS6_N 23..156 CDD:408998 31/103 (30%)
Smc <169..>463 CDD:440809 82/324 (25%)
Sass6XP_063138007.1 None

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