DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sas-6 and sas-6

DIOPT Version :9

Sequence 1:NP_651756.1 Gene:Sas-6 / 43555 FlyBaseID:FBgn0039731 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_502660.1 Gene:sas-6 / 178345 WormBaseID:WBGene00012888 Length:492 Species:Caenorhabditis elegans


Alignment Length:465 Identity:95/465 - (20%)
Similarity:179/465 - (38%) Gaps:142/465 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDNVVRMLKDCQSGKLELHLTTRD- 121
            |:..::...|...::..|:::..:|.|.:|..|.|.|..|...:::            ||..:: 
 Worm    51 LKFEISRSDDFEFLFSETLNNEKYQILARDHDLTVDFDAFPKVIIQ------------HLLCKNI 103

  Fly   122 -QNLSSGREVHDYYLQFVEIRSFKNLVHLSLPCRSAPLNTVL--------FYINSMLEASHKKQY 177
             :||....|        |:.|.......::.|.:...:|.:|        |.:.|....|..|.:
 Worm   104 VKNLEEDGE--------VDARKKAGYHSIADPGKPTEINIILDAEKNFCSFELFSKTPISKGKIF 160

  Fly   178 ILEQSMQQMQAEINAQRAHAERLTTENTNIREALAENTRILEEKHAAEVHQYQE-KLSKINEQRS 241
            .:              :.||.|              ...::  .|..::...|. |||...:. :
 Worm   161 SI--------------KLHAVR--------------GDHLI--SHLLKICSSQAVKLSTFYKS-A 194

  Fly   242 NELERNRRAISGFQAQLDKASLEKAELKSAQEQAEKRCQTLSEELSCCKARVCTLKEQNDKLHGD 306
            :||...|:.....:.|::|.|..|.|.    |:..::.:.|.:|:.       .:||:.:     
 Worm   195 DELASLRQKCGDLEKQVEKLSGVKEEF----EEMSEKFKELEDEVE-------LVKEERE----- 243

  Fly   307 VANIRKHERKLEYKIEDLKQHTVELQEHIQKGNKEKANIAAELEAE----------KKILHTK-- 359
              |||......|.::.||||.|..||:.::: |:|:..|...:..|          :.:.|.|  
 Worm   244 --NIRLLVEDKEDEVADLKQDTESLQKQLEE-NQEELEIVGNMLREEQGKVDQLQKRNVAHQKEI 305

  Fly   360 ---RQALEMASEEISKANQIIVK----QSQELLNLKKTIAWRTEVALQQEKAVQAKESLL-SLRE 416
               |..|..|...:.||:|::.:    |:|:.|:::|        ..:.|..::.|:|:: ||.|
 Worm   306 GKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRK--------LGELEADLKEKDSMVESLTE 362

  Fly   417 NELREARITIEKLREEIPQQ----LQSMRNFAQGLEQKYSKQILILKERLA-------------- 463
                    ||..||:|:..:    .::|.:|     :|.|.:...|||::|              
 Worm   363 --------TIGILRKELENEKLKAAENMDSF-----EKLSMENENLKEKIAHYRAQRFSPAPSGL 414

  Fly   464 --IPTGKENR 471
              :.||..||
 Worm   415 PGLQTGLTNR 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sas-6NP_651756.1 SAS-6_N 59..152 CDD:293139 16/94 (17%)
sas-6NP_502660.1 SAS-6_N 52..>108 CDD:293139 12/67 (18%)
PCRF 190..>259 CDD:305100 17/87 (20%)
NUDE_C 231..>268 CDD:282704 14/50 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56642
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR44281
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.