DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and HNRNPDL

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_112740.1 Gene:HNRNPDL / 9987 HGNCID:5037 Length:420 Species:Homo sapiens


Alignment Length:399 Identity:84/399 - (21%)
Similarity:130/399 - (32%) Gaps:116/399 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PKYGPGGGSRG-QPGSGDNPGRRPSQVQGGGADK----------RPHESNTNFKRNFREEVGGRF 127
            |...|....:| :........::||::.||.|.|          |.|..:::.:|:.......|.
Human    43 PSLAPSSARQGARRAQRHVTAQQPSRLAGGAAIKGGRRRRPDLFRRHFKSSSIQRSAAAAAATRT 107

  Fly   128 SNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGFRNKFAGGGKFGGSAGNE 192
            :.:.|.:.:|...:  .:...||..:     :::|...|.|.|| |.....|.||..:..|..:.
Human   108 ARQHPPADSSVTME--DMNEYSNIEE-----FAEGSKINASKNQ-QDDGKMFIGGLSWDTSKKDL 164

  Fly   193 GRFGSNRFQQRD---NSGPQPGRRN------FKNSPT-------SGYRGGGNNSD---------- 231
            ..:.|...:..|   .:.|..||..      ||::.:       ..::..|...|          
Human   165 TEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGK 229

  Fly   232 ------FQGGSSSSGGGGSVNQRAGGGG-------PGPSHVRQDRRGFAL-------PV------ 270
                  |.||.|.......:.:..|..|       |..:.. .:||||..       ||      
Human   230 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKT-NERRGFCFITYTDEEPVKKLLES 293

  Fly   271 ----------------------EHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGRGFFNGGGGGF 313
                                  :.||||.|    |.|....|..||.|    .|||.......||
Human   294 RYHQIGSGKCEIKVAQPKEVYRQQQQQQKG----GRGAAAGGRGGTRG----RGRGQGQNWNQGF 350

  Fly   314 NDRRDSSH-ETSSPQGGPSKRGGSGGRNHNQNGINAYHSEFPPLGSGGG---GPGQRNRFNGPRP 374
            |:..|..: ..:|..||.....|.||  ::..|.|     :...|.|.|   ..||::.:.....
Human   351 NNYYDQGYGNYNSAYGGDQNYSGYGG--YDYTGYN-----YGNYGYGQGYADYSGQQSTYGKASR 408

  Fly   375 GPNMGGNRR 383
            |   |||.:
Human   409 G---GGNHQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069
PABP-1234 <18..173 CDD:130689 22/109 (20%)
HNRNPDLNP_112740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83 9/39 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..120 4/23 (17%)
RRM1_hnRPDL 149..224 CDD:410152 13/74 (18%)
RRM2_hnRPDL 234..308 CDD:409998 13/74 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..348 14/42 (33%)
Necessary for interaction with TNPO1. /evidence=ECO:0000269|PubMed:9524220 342..420 21/83 (25%)
Necessary for its nuclear import and export 396..420 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..420 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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