DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7903 and IST3

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_012270.1 Gene:IST3 / 854821 SGDID:S000001444 Length:148 Species:Saccharomyces cerevisiae


Alignment Length:83 Identity:21/83 - (25%)
Similarity:40/83 - (48%) Gaps:13/83 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKVFVGSLPRCKPE-ELRRLFTNYGSVVECDVMNR-------CAFVHLENTDMAEAAIAA--LNG 59
            |.:::|:|.|...| ::..:|:.||..|:. :::|       ..|.:|:..|.....:|.  |||
Yeast    31 AYIYIGNLNRELTEGDILTVFSEYGVPVDV-ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNG 94

  Fly    60 TIFKGQPIVVEAG--RPK 75
            ....|:.:.::..  |||
Yeast    95 FKIGGRALKIDHTFYRPK 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 17/73 (23%)
PABP-1234 <18..173 CDD:130689 17/70 (24%)
IST3NP_012270.1 RRM_ist3_like 22..109 CDD:409845 18/78 (23%)

Return to query results.
Submit another query.