Protein Alignment CG7903 and SGN1

DIOPT Version :10

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_012266.1
• Gene: SGN1 / 854817
• SGDID: S000001440
• Length: 250
• Species: Saccharomyces cerevisiae
• Alignment Length: 235
• Identity: 39/235 - (16%)
• Similarity: 76/235 - (32%)
• Gaps: 95/235 - (40%)

  Fly     7 VFVGSL-PRCKPEELRRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALNGTIF 62
            :|||:: |...||::...|.:.|.:....::        ....::..|:....|.|: .|||...
Yeast    66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL-QLNGGEL 129

  Fly    63 KGQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEVGGRF 127
            ||:.|.|                       .|:.:.:.|             |.|::
Yeast   130 KGKKIAV-----------------------SRKRTNIPG-------------FNRHY-------- 150

  Fly   128 SNEGPRSSNSSAAKFGPVRNESNYRQQ-------------RSAPYSKGPPNNESSNQGQGF-RNK 178
                              .:::.|.||             .:.||....|.|:|.||..|: :|.
Yeast   151 ------------------NSQNQYFQQWQWNYPLMAYPNPDTFPYYPPYPPNQSPNQNFGYNKNN 197

  Fly   179 FAGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNS 218
            :     :.....|:.|    .||::..:..:...:|.:::
Yeast   198 Y-----YRSPYNNKNR----TFQKKHFNSAKDSTKNIRST 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM_SF	6..70	CDD:473069	17/71 (24%)
		PABP-1234	<18..173	CDD:130689	27/175 (15%)
SGN1	NP_012266.1	PABP-1234	<52..>202	CDD:130689	34/203 (17%)
		RRM_II_PABPs	65..137	CDD:409747	18/94 (19%)