DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and AT1G76460

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_565132.2 Gene:AT1G76460 / 843979 AraportID:AT1G76460 Length:285 Species:Arabidopsis thaliana


Alignment Length:313 Identity:71/313 - (22%)
Similarity:101/313 - (32%) Gaps:99/313 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTAKVFVGSLP-RCKPEELRRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALN 58
            |..|||||.|. ..:.|.||:.|..||.::|..|:        ....||...:.:.|..|.|   
plant    22 TFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACA--- 83

  Fly    59 GTIFKGQPIVVEAGRPKYGPGGGSRGQPGS-------GDNPGR-RPSQVQGGGADKRPHESNTNF 115
                  .|..:..|| :......|.|:|..       .:.||| ||:.         |:..|.  
plant    84 ------DPTPIIDGR-RANCNLASLGRPRPPLPYAVIPNMPGRLRPAS---------PYIGNV-- 130

  Fly   116 KRNFREEVGGRFSNEGPRSSNSSAAKFGPVRNESNYRQQRSAPY-------------SKGPPNNE 167
                          :|||.|..           .||..|:..||             :.||....
plant   131 --------------QGPRGSLI-----------GNYPYQQPLPYNYQQGVVYPYGVTAYGPEYMY 170

  Fly   168 SSNQGQGFRNKFAGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDF 232
            |  |.||..:.:. |.::....|..|...|..:|....|...|....:  :...||...|::...
plant   171 S--QSQGLYSPYM-GQQYLQVYGVPGAVNSPVYQYGQLSQTIPNGHGY--TAVQGYSVPGSHILQ 230

  Fly   233 QGG------SSSSGGGGSVNQRAGGGGPGP--SHVRQDRRGFALPVEHQQQQM 277
            .||      ::||.........:|..||.|  ||:          :.|..|.|
plant   231 LGGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHI----------IVHSPQFM 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 20/72 (28%)
PABP-1234 <18..173 CDD:130689 39/183 (21%)
AT1G76460NP_565132.2 RRM_RBM24_RBM38_like 24..99 CDD:409818 22/84 (26%)
PABP-1234 <37..245 CDD:130689 55/258 (21%)

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