DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7903 and AT1G22910

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_973889.1 Gene:AT1G22910 / 838898 AraportID:AT1G22910 Length:347 Species:Arabidopsis thaliana


Alignment Length:246 Identity:53/246 - (21%)
Similarity:83/246 - (33%) Gaps:83/246 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTAKVFVGSLP-RCKPEELRRLFTNYGSVVECDVMNRCA--------FVHLENTDMAEAA----- 53
            |..|||||.|. ....|.:::.|..:|.::|..|:...|        ||.....:.|.:|     
plant    11 TYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVDAT 75

  Fly    54 -----------IAALNGTIFKGQPIVVEAGRPKYGPGGG--------SRGQPGSGDNPGRRPSQV 99
                       :|:|.  :.:.:|     ..|.:|.||.        |..|.|.|..|..:|...
plant    76 PVIDGRRANCNLASLG--LQRSKP-----STPNHGGGGRINNMRVMMSTMQTGFGPPPPPQPPTF 133

  Fly   100 QG---------GGADKRPHESN--TNFKRNFREEVGGRFSNEGPRSSN--------SSAAKFGP- 144
            ..         |.:...|..|:  ||....:....||::...|.|:|.        :||..|.| 
plant   134 THYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGNRNSGGGGLTAAAASATPFYPC 198

  Fly   145 ---------------VRNESNYRQQRSAPYSKGPPNNESSNQGQGFRNKFA 180
                           ..:.|:|.     |:...||   :.:..||.||:.:
plant   199 GGGHGGVQFSQPQPFYHHLSSYN-----PHHYSPP---TFSMQQGSRNRLS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 19/88 (22%)
PABP-1234 <18..173 CDD:130689 42/221 (19%)
AT1G22910NP_973889.1 RRM_RBM24_RBM38_like 13..88 CDD:409818 16/74 (22%)

Return to query results.
Submit another query.