DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and ATRZ-1A

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_189273.1 Gene:ATRZ-1A / 822246 AraportID:AT3G26420 Length:245 Species:Arabidopsis thaliana


Alignment Length:400 Identity:81/400 - (20%)
Similarity:128/400 - (32%) Gaps:115/400 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IGGARGKKFSFPSGDKSA---DKQPSSKSTGKSSSKAVPPPKVTPPKDFYAVLGVSRTASFNDIK 76
            |.||.      |:|..|.   .|:.|...:|.....:...|.:..|||         ..|.|:. 
plant   369 INGAH------PAGSHSPTVHQKKNSQSGSGNKDPASNNLPHLLSPKD---------AKSKNEF- 417

  Fly    77 KAYYELAKQFHPDRRTAQQNSNSTAKESTAAMEKKFSQITEAYEALLVEVKHRTESVVDLNP--- 138
                    .|.|:::|:........|.::.:...:.|.:.....:.....||...|.:|..|   
plant   418 --------DFSPEQKTSDVPGAKYTKSNSRSQHNRHSFMEGKTGSWQPSEKHTRHSYIDTIPQSS 474

  Fly   139 ---SLYRDLQKKHMLLPKNGQSGNTAPPTTLINELNYEDVVLTLTFKESIEGTVRELTLPIGVKC 200
               |.|.:..|.|.:|..:...||.:.....|.|.|          ......:..:|..|.....
plant   475 KKSSSYMNYSKNHGVLTDSKSVGNLSEARGQILEPN----------SRYFPSSCHDLNSPTSPAA 529

  Fly   201 DRCSYTGTQSALDPEGLCSICHGTGKQEFHTESGK-----------LLMPCKFCNGSKHTPHKLT 254
            .|  :..::..|.|.|      .|.::|...||.:           |.:|.:.  .|.|: |.|:
plant   530 PR--HGDSRGMLSPSG------RTNRKEGTLESRRPTTKHSRTMEELKLPDQM--DSSHS-HSLS 583

  Fly   255 CPK---CHGKGIV----MKQHPLTVSIPKASQHKDRLKVRIPGLQRQLTVILHVQDQGHFRRVGL 312
            .|.   .:|.|..    .:|.|     .:.|.:..|.:||:.|....|.|     .||       
plant   584 APHESFSYGLGYTSPFSSQQRP-----HRHSMYVSRDRVRVKGTDAALNV-----GQG------- 631

  Fly   313 NIYSTEEITMLKAIRGGDLSIRGINGIFNVYLEPGTQFGTELRIPGKGLRDELRQDV---GDHIL 374
                       .|.|...|.:          |.|..|..|..|..|.. |::..:|.   ||.:.
plant   632 -----------MASRASSLQL----------LSPQVQHRTLTRSVGSS-REDCTEDTTRQGDQVP 674

  Fly   375 TLQIRLPRTL 384
            : ::...|||
plant   675 S-EVTHSRTL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 13/57 (23%)
PABP-1234 <18..173 CDD:130689 33/163 (20%)
ATRZ-1ANP_189273.1 RRM2_NsCP33_like 8..83 CDD:410187
ZnF_C2HC 120..135 CDD:197667
U2AF_lg 136..>242 CDD:273727
PRK04537 <208..240 CDD:235307
Blue background indicates that the domain is not in the aligned region.

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