DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and Ralyl

DIOPT Version :9

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001343965.1 Gene:Ralyl / 76897 MGIID:1924147 Length:307 Species:Mus musculus


Alignment Length:176 Identity:50/176 - (28%)
Similarity:71/176 - (40%) Gaps:41/176 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKVFVGSLPRC--KPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            ::||:|:|...  |..::..:|:.||.:|.|.|....|||...:...|.||:|..|..:..|||:
Mouse    35 SRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPL 99

  Fly    68 VVE-AGRPK-YGPGGGSRGQPGSG--------------------------------DNPGRRPSQ 98
            .:. ||.|| |.|..||: :|.|.                                |..||.|..
Mouse   100 DINMAGEPKPYRPKPGSK-RPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPP 163

  Fly    99 VQGGGADKRPHESNTNFKRN---FREEVGGRFSNEGPRSSNSSAAK 141
            .:.....|||..:.|..:|.   |..: ||..|..|..||:.|..|
Mouse   164 PRAVIPLKRPRVAVTTTRRGKGVFSMK-GGSRSTVGGSSSSGSKLK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM <4..168 CDD:223796 50/176 (28%)
RRM_SF 6..70 CDD:302621 22/65 (34%)
RalylNP_001343965.1 RRM_SF 29..111 CDD:418427 26/75 (35%)
XhlA 215..>260 CDD:402419
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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