DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and Rbm14

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_063922.2 Gene:Rbm14 / 56275 MGIID:1929092 Length:669 Species:Mus musculus


Alignment Length:532 Identity:120/532 - (22%)
Similarity:174/532 - (32%) Gaps:186/532 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            |.|:|||:: ..|..:|||.||...|.|:||||:...||||:|....|:||||.|||...||:.|
Mouse    78 TWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRI 142

  Fly    68 VVEAGR--PKYGP-----GGGSRGQPGSGDN--PGRRPSQVQGGGADKRPHESNTNFKRNFREEV 123
            .||...  .|.||     .|....:||:||.  ||.       ||     ..:..::::.|....
Mouse   143 NVELSTKGQKKGPALAIQSGDKTKKPGAGDTAFPGT-------GG-----FSATFDYQQAFGNST 195

  Fly   124 GGRFSNEGP--------------RSSNSSAAKFGPVRNE-SNYRQQRS----APYSKGPPNNESS 169
            || |..:..              |.|...|:...|:..: :.||.|.|    |.|...|    |:
Mouse   196 GG-FDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQP----SA 255

  Fly   170 NQGQGFRNK--------------------FAGG--------------GKFGG---SAGNEGRFGS 197
            :.|.|:|.:                    :.|.              |.:||   ||.....:|.
Mouse   256 SLGVGYRTQPMAAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGVQPSASALSTYGG 320

  Fly   198 --------NRFQQRDNS----GPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQRAG 250
                    |.:..:.:|    |.||.....:.:.:.|.|...::.:.||.:||.|..|:.....|
Mouse   321 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYG 385

  Fly   251 G---------GGPGPSHVRQDRRGF---ALPVEHQQ-----------------------QQMGF- 279
            .         |....|:..|....:   :.|...||                       |...: 
Mouse   386 AQSAASSLAYGAQAASYSAQPSASYSAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYA 450

  Fly   280 --------GRFGNGP-----MNS-------GNRGTNGGNPPGGRGFFNGGGGGFNDRRDSS---- 320
                    |.:|..|     :||       |..|:.|...........|....:..:..::    
Mouse   451 AQATTPMAGSYGAQPVVQTQLNSYGAQASIGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAP 515

  Fly   321 HETSS-------------PQGGPSKRGGSGGRNHN-----------QNGINAYHSEFPPLGSGGG 361
            :.|.|             ||...|.||..|.....           ..|..|..:..||      
Mouse   516 YRTQSSASLAASYAAQQHPQAAASYRGQPGSAYDGTGQPSAAYLSMSQGAVANANSTPP------ 574

  Fly   362 GPGQRNRFNGPR 373
             |.:|.|.:.||
Mouse   575 -PYERTRLSPPR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 32/64 (50%)
PABP-1234 <18..173 CDD:130689 57/182 (31%)
Rbm14NP_063922.2 RRM1_CoAA 1..71 CDD:410020
PABP-1234 <3..280 CDD:130689 66/218 (30%)
RRM2_CoAA 79..146 CDD:410021 33/66 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..175 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..232 7/39 (18%)
TRBP-interacting domain, interaction with STIL. /evidence=ECO:0000250|UniProtKB:Q96PK6 307..354 9/46 (20%)
PRK13875 <319..433 CDD:237537 21/113 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..590 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.

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