DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and mod

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_524614.2 Gene:mod / 43764 FlyBaseID:FBgn0002780 Length:542 Species:Drosophila melanogaster


Alignment Length:76 Identity:17/76 - (22%)
Similarity:30/76 - (39%) Gaps:28/76 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LIGGARGKK----------FSFPSGD--KSADKQPSSKS-TGKSSSKAVPPPKVTPPKDFYAVLG 65
            |:||..|.:          :::..|.  |||:..|:.:| |.||:.               ..||
  Fly   153 LLGGLNGIETSNGGIVKTLWNYAKGQEIKSANSSPAKRSLTLKSNG---------------GTLG 202

  Fly    66 VSRTASFNDIK 76
            ..::...|:|:
  Fly   203 GRKSIEANEIE 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 15/68 (22%)
PABP-1234 <18..173 CDD:130689 14/72 (19%)
modNP_524614.2 RRM_SF 177..244 CDD:473069 13/52 (25%)
PABP-1234 262..>470 CDD:130689
RRM_SF 339..414 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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