DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and maca

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_650473.1 Gene:maca / 41892 FlyBaseID:FBgn0038345 Length:251 Species:Drosophila melanogaster


Alignment Length:128 Identity:34/128 - (26%)
Similarity:61/128 - (47%) Gaps:17/128 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NTTAKVFVGSLPRCKPE-ELRRLFTNYGSVVECDVM-----NR---CAFVHLENTDMAEAAIAAL 57
            :|::.::||:||....| ::|.||..||::|:.:::     ||   .||:..|....||.|...:
  Fly   124 STSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGM 188

  Fly    58 NGTIFKG--QPIVVE-AGRPKYGPGGGSRG-----QPGSGDNPGRRPSQVQGGGADKRPHESN 112
            :..:.:|  :|:.|: ..|.|.|....|.|     :..|...|.:|..:.......||..:|:
  Fly   189 DRYMIEGASRPLTVKFVEREKKGSSSTSSGSQYKDKRKSSPPPYKRRERTNDHHVSKRSRDSD 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 21/74 (28%)
PABP-1234 <18..173 CDD:130689 29/112 (26%)
macaNP_650473.1 sex-lethal <41..>210 CDD:273740 24/85 (28%)

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