DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and zgc:77262

DIOPT Version :9

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_991217.1 Gene:zgc:77262 / 402952 ZFINID:ZDB-GENE-040426-1811 Length:331 Species:Danio rerio


Alignment Length:291 Identity:66/291 - (22%)
Similarity:102/291 - (35%) Gaps:81/291 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNTTAKVFVGSLPR-CKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKG 64
            :....|::||::|. ....:::.||..:|.|||||::...||||::..:.|..|||.||.:...|
Zfish    74 VRNATKIYVGNVPEGVAAAKIKELFQPFGKVVECDIVKNYAFVHMQRENEALDAIAKLNHSKVDG 138

  Fly    65 QPIVVEAGRPKYGPGGGSRGQ-----------PGSGDNP----------------GRRPSQVQGG 102
            |.|.|...|.  .|....||:           |...|:|                ||.|......
Zfish   139 QKIFVSLSRS--NPSRNGRGEDYYPPPPPHYPPHPHDHPHFLPPRPPPRDYYPPRGRIPPPPPLP 201

  Fly   103 GADKRPHESNTNFKRNFREE----VGGRFSNEGPRS----------SNSSAAKFGPVRNESNYRQ 153
            ....|.:.....::|:.|.:    ...||.:..|..          |...|:::...|:....|:
Zfish   202 PPPPRSYYERDPYERSLRHDPYAPPSPRFYDRDPYDRRLPPPQRPVSPPVASRYYRERSPLGGRR 266

  Fly   154 QRSAPYSKGPPNNESSNQGQGFRNKFAGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNS 218
            ....|....||       ..||...||..|.                    :|.|.|     .::
Zfish   267 SLLPPPPPPPP-------PAGFARSFARNGA--------------------SSAPPP-----PSA 299

  Fly   219 PTSGYR-----GGGNNSDFQGGSSSSGGGGS 244
            |:|.|:     .|.:..|:.....|:|.|.|
Zfish   300 PSSHYQRYSVGSGFDKDDYMEDKYSNGFGRS 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM <4..168 CDD:223796 49/205 (24%)
RRM_SF 6..70 CDD:302621 25/64 (39%)
zgc:77262NP_991217.1 RRM1_2_CoAA_like 3..68 CDD:240789
RRM1_2_CoAA_like 79..143 CDD:240789 25/63 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1563362at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.970

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