DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and rbm14b

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_021333123.2 Gene:rbm14b / 402858 ZFINID:ZDB-GENE-040426-2455 Length:560 Species:Danio rerio


Alignment Length:107 Identity:45/107 - (42%)
Similarity:63/107 - (58%) Gaps:10/107 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            :.|||||:| ..|..|:|:.||..:|.|:|||.:...||||:||.:.|..||.||:||.|||:|:
Zfish    82 STKVFVGNLSSMCTTEDLQELFQTFGKVLECDKVKGYAFVHMENKEDALQAIEALHGTSFKGRPL 146

  Fly    68 VVEAGR---PKYGPGGG----SRGQPG--SGDNPGRRPSQVQ 100
            .||..:   .|..|.|.    |.|:.|  :|:.|..:|:..|
Zfish   147 SVELSKVQPSKQTPTGKIPCVSCGKQGHYAGECPAGKPTLEQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 33/64 (52%)
PABP-1234 <18..173 CDD:130689 38/92 (41%)
rbm14bXP_021333123.2 None

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