| Sequence 1: | NP_651755.2 | Gene: | CG7903 / 43554 | FlyBaseID: | FBgn0039730 | Length: | 384 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_648764.1 | Gene: | cocoon / 39665 | FlyBaseID: | FBgn0036496 | Length: | 318 | Species: | Drosophila melanogaster |
| Alignment Length: | 132 | Identity: | 30/132 - (22%) |
|---|---|---|---|
| Similarity: | 44/132 - (33%) | Gaps: | 31/132 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 KVFVGSLPRC----KPEELRRLFTNYGSVVECDVMNRC-AFVHLENTDMAEAAIAALNGTIFKGQ 65
Fly 66 PIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFK----RNFREEVGGR 126
Fly 127 FS 128 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG7903 | NP_651755.2 | RRM_SF | 6..70 | CDD:473069 | 18/68 (26%) |
| PABP-1234 | <18..173 | CDD:130689 | 23/116 (20%) | ||
| cocoon | NP_648764.1 | TDP43_N | 3..78 | CDD:465833 | |
| RRM1_TDP43 | 108..181 | CDD:409760 | |||
| RRM2_TDP43 | 193..262 | CDD:409761 | 19/71 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||