Protein Alignment CG7903 and cocoon

DIOPT Version :9

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_001261874.1
• Gene: cocoon / 39665
• FlyBaseID: FBgn0036496
• Length: 318
• Species: Drosophila melanogaster
• Alignment Length: 132
• Identity: 30/132 - (22%)
• Similarity: 44/132 - (33%)
• Gaps: 31/132 - (23%)

  Fly     6 KVFVGSLPRC----KPEELRRLFTNYGSVVECDVMNRC-AFVHLENTDMAEAAIAALNGTIFKGQ 65
            |||||   ||    :.::||..|:.:|.|::..:.... ||..:...|.....:......|.||.
  Fly   193 KVFVG---RCTEDIEADDLREYFSKFGEVIDVFIPKPFRAFSFVTFLDPYVPRVVCGEKHIIKGV 254

  Fly    66 PIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFK----RNFREEVGGR 126
            .:.|.....|.........|..:.:|                   .:.|||    .|||......
  Fly   255 SVHVSTADKKNVQNKNQLFQTNNYNN-------------------LDNNFKMQPANNFRMHPANN 300

  Fly   127 FS 128
            ||
  Fly   301 FS 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM	<4..168	CDD:223796	30/132 (23%)
		RRM_SF	6..70	CDD:302621	18/68 (26%)
cocoon	NP_001261874.1	RRM1_TDP43	108..184	CDD:240767
		RRM2_TDP43	193..262	CDD:240768	19/71 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439648
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930