DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and rbm14

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_989050.1 Gene:rbm14 / 394647 XenbaseID:XB-GENE-491627 Length:468 Species:Xenopus tropicalis


Alignment Length:297 Identity:81/297 - (27%)
Similarity:117/297 - (39%) Gaps:45/297 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            |.|:|||:: ..|:..|:|::|..:|.|||||::...||||:.....:.|||.||||...||:.|
 Frog    83 TWKIFVGNVSSSCEVSEIRKMFEEHGRVVECDIVKDYAFVHMTRESESRAAIEALNGKEVKGKRI 147

  Fly    68 VVEAG---RPKYGPGGG-SRGQPGSGDNPGRRPSQVQGGGADKRPHES-------NTNFKRNFRE 121
            .||..   ||....|.. ||.:|...:.|..|.|.     ..:|..|:       .:|::|...|
 Frog   148 NVEMSHKVRPVAANGSSHSRRRPDDREAPQSRESY-----NHRRATEAAYASYALKSNYERYAPE 207

  Fly   122 EVGGRF----SNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGFRNKFAGG 182
              ..|:    |...|.|....|....|:|.......|.:|..||             :|::.||.
 Frog   208 --SSRYDLYESRPRPTSPMYYARDRSPMRRPDYALSQTAALASK-------------YRSEAAGF 257

  Fly   183 GKF-GGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGS-- 244
            |.. .|.:|......|:...|..........:....|..||| |....:.:....|:....||  
 Frog   258 GNLASGYSGQASALASSYSNQASALASSYNNQRAYTSSASGY-GTDQIAAYSTQPSAYANQGSSI 321

  Fly   245 ----VNQRAGGGGPGPSHV-RQDRRGFALPVEHQQQQ 276
                ....|...|..|||: ........:|..::|||
 Frog   322 YGTQAASLASSYGSQPSHLSASPYASSVVPSAYRQQQ 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 28/64 (44%)
PABP-1234 <18..173 CDD:130689 50/169 (30%)
rbm14NP_989050.1 RRM1_CoAA 8..76 CDD:410020
RRM2_CoAA 84..151 CDD:410021 29/66 (44%)
Blue background indicates that the domain is not in the aligned region.

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